Gm26973 Gene Detail

Summary

• Symbol
  Gm26973
• Name
  predicted gene, 26973

• Feature Type
  lncRNA gene
• IDs
  MGI:5504088
  NCBI Gene: 102631560
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:56651794-56683371 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  352 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504088	lncRNA gene	Chr12:56582128-56683371 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003136	antisense lncRNA gene	Chr12:55654103-55728735 (+)
A/J	MGP_AJ_G0003113	antisense lncRNA gene	Chr12:53635911-53701911 (+)
AKR/J	MGP_AKRJ_G0003093	antisense lncRNA gene	Chr12:55319924-55400815 (+)
BALB/cJ	MGP_BALBcJ_G0003100	antisense lncRNA gene	Chr12:53979374-54052064 (+)
C3H/HeJ	MGP_C3HHeJ_G0003056	antisense lncRNA gene	Chr12:55396189-55470013 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003243	antisense lncRNA gene	Chr12:57304801-57374953 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002777	antisense lncRNA gene	Chr12:52101852-52170280 (+)
CAST/EiJ	MGP_CASTEiJ_G0003025	antisense lncRNA gene	Chr12:50282626-50356980 (+)
CBA/J	MGP_CBAJ_G0003053	antisense lncRNA gene	Chr12:59325439-59403382 (+)
DBA/2J	MGP_DBA2J_G0003058	antisense lncRNA gene	Chr12:53534217-53606908 (+)
FVB/NJ	MGP_FVBNJ_G0003078	antisense lncRNA gene	Chr12:52831578-52904903 (+)
LP/J	MGP_LPJ_G0003133	antisense lncRNA gene	Chr12:55614552-55705799 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003067	antisense lncRNA gene	Chr12:60874172-60960711 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003247	antisense lncRNA gene	Chr12:54765689-54839278 (+)
PWK/PhJ	MGP_PWKPhJ_G0002983	antisense lncRNA gene	Chr12:47901197-47971110 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002927	antisense lncRNA gene	Chr12:49200528-49272378 (+)
WSB/EiJ	MGP_WSBEiJ_G0003056	antisense lncRNA gene	Chr12:55285032-55360808 (+)

Homology

• Gene Tree
  Gm26973
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm26973
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000098172 (Evidence)
• NCBI Gene
  102631560

Representative Sequences			Length	Strain/Species
genomic	102631560	NCBI Gene Model | MGI Sequence Detail	31578	C57BL/6J
transcript	XR_004937602	RefSeq | MGI Sequence Detail	1421	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;