Gm26953 Gene Detail

Summary

• Symbol
  Gm26953
• Name
  predicted gene, 26953

• Feature Type
  lncRNA gene
• IDs
  MGI:5504068
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:112363306-112381586 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  488 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504068	lncRNA gene	Chr5:112363306-112381586 (+)
129S1/SvImJ	ENSMUSG00200023437	lncRNA gene	Chr5:106104695-106123019 (+)
A/J	ENSMUSG00195042275	lncRNA gene	Chr5:105613336-105631603 (+)
AKR/J	ENSMUSG00220051667	lncRNA gene	Chr5:105124033-105142360 (+)
BALB/cJ	ENSMUSG00180049232	lncRNA gene	Chr5:105754764-105773034 (+)
C3H/HeJ	ENSMUSG00175049228	lncRNA gene	Chr5:107736257-107754572 (+)
C57BL/6NJ	ENSMUSG00215034037	lncRNA gene	Chr5:105761741-105780002 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006151	lincRNA gene	Chr5:105141590-105143009 (+)
CAST/EiJ	ENSTCUG00005035042	lncRNA gene	Chr5:104937334-104955669 (+)
CBA/J	ENSMUSG00210047180	lncRNA gene	Chr5:106488344-106506650 (+)
DBA/2J	ENSMUSG00185047677	lncRNA gene	Chr5:109523550-109541872 (+)
FVB/NJ	ENSMUSG00205052017	lncRNA gene	Chr5:105392506-105410780 (+)
JF1/MsJ	ENSUMUG00000052928	lncRNA gene	Chr5:112375435-112393784 (+)
LP/J	ENSMUSG00230049713	lncRNA gene	Chr5:113643044-113661367 (+)
NOD/ShiLtJ	ENSMUSG00190049731	lncRNA gene	Chr5:105428567-105446836 (+)
NZO/HlLtJ	ENSMUSG00225025913	lncRNA gene	Chr5:121279484-121297742 (+)
PWK/PhJ	ENSLUMG00010038401	lncRNA gene	Chr5:104285033-104303359 (+)
SPRET/EiJ	ENSMSPG00010047038	lncRNA gene	Chr5:107544862-107563441 (+)
WSB/EiJ	ENSIUOG00005045285	lncRNA gene	Chr5:108129358-108147707 (+)

Homology

• Gene Tree
  Gm26953
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm26953
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  41

• Ensembl
  ENSMUSG00000097986 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097986	Ensembl Gene Model | MGI Sequence Detail	18281	C57BL/6J
transcript	ENSMUST00000213051	Ensembl | MGI Sequence Detail	2087	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17