Gm26927 Pseudogene Detail

Summary

• Symbol
  Gm26927
• Name
  predicted gene, 26927

• Feature Type
  pseudogene
• IDs
  MGI:5504042
  NCBI Gene: 102631850
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:84487268-84488232 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504042	pseudogene	Chr13:84487268-84488232 (-)
129S1/SvImJ	ENSMUSG00200006382	pseudogene	Chr13:78950369-78951333 (-)
A/J	ENSMUSG00195025616	pseudogene	Chr13:79464521-79465485 (-)
AKR/J	ENSMUSG00220016924	pseudogene	Chr13:77998762-77999726 (-)
BALB/cJ	ENSMUSG00180001438	pseudogene	Chr13:79958746-79959710 (-)
C3H/HeJ	ENSMUSG00175019294	pseudogene	Chr13:80209920-80210884 (-)
C57BL/6NJ	ENSMUSG00215002645	pseudogene	Chr13:80068081-80069045 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009894	pseudogene	Chr13:78582674-78583647 (-)
CAST/EiJ	ENSTCUG00005004076	pseudogene	Chr13:79388935-79389899 (-)
CBA/J	ENSMUSG00210005739	pseudogene	Chr13:79494663-79495627 (-)
DBA/2J	ENSMUSG00185010130	pseudogene	Chr13:83175041-83176005 (-)
FVB/NJ	ENSMUSG00205013109	pseudogene	Chr13:78943876-78944840 (-)
JF1/MsJ	ENSUMUG00000022055	pseudogene	Chr13:82910073-82911037 (-)
LP/J	ENSMUSG00230004438	pseudogene	Chr13:93164911-93165875 (-)
NOD/ShiLtJ	ENSMUSG00190008441	pseudogene	Chr13:79515752-79516716 (-)
NZO/HlLtJ	ENSMUSG00225030649	pseudogene	Chr13:85681840-85682804 (-)
PWK/PhJ	ENSLUMG00010014597	pseudogene	Chr13:79055978-79056942 (-)
SPRET/EiJ	ENSMSPG00010001381	pseudogene	Chr13:80041929-80042887 (-)
WSB/EiJ	ENSIUOG00005017454	pseudogene	Chr13:78784332-78785296 (-)

Homology

• Gene Tree
  Gm26927
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26927
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000098245 (Evidence)
• NCBI Gene
  102631850

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098245	Ensembl Gene Model | MGI Sequence Detail	965	C57BL/6J
transcript	ENSMUST00000182385	Ensembl | MGI Sequence Detail	965	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm26927:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr123347	Chr13:84488303-84488307 (-)	-73 bp