Gm26881 Gene Detail

Summary

• Symbol
  Gm26881
• Name
  predicted gene, 26881

• Feature Type
  lncRNA gene
• IDs
  MGI:5477375
  NCBI Gene: 105247120
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:43045898-43053261 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  255 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477375	lncRNA gene	Chr4:43045898-43053261 (+)
129S1/SvImJ	ENSMUSG00200005633	lncRNA gene	Chr4:39082025-39089682 (+)
A/J	ENSMUSG00195003699	lncRNA gene	Chr4:39564614-39571808 (+)
AKR/J	ENSMUSG00220036950	lncRNA gene	Chr4:39248655-39255851 (+)
BALB/cJ	ENSMUSG00180027301	lncRNA gene	Chr4:39151381-39158563 (+)
C3H/HeJ	ENSMUSG00175023704	lncRNA gene	Chr4:39295724-39302918 (+)
C57BL/6NJ	ENSMUSG00215034377	lncRNA gene	Chr4:39062814-39070129 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005833	lincRNA gene	Chr4:37150899-37158688 (+)
CAST/EiJ	ENSTCUG00005004854	lncRNA gene	Chr4:39328951-39336205 (+)
CBA/J	ENSMUSG00210008085	lncRNA gene	Chr4:38982160-38989368 (+)
DBA/2J	ENSMUSG00185006770	lncRNA gene	Chr4:39345623-39352839 (+)
FVB/NJ	ENSMUSG00205028464	lncRNA gene	Chr4:38588844-38596055 (+)
JF1/MsJ	ENSUMUG00000031363	lncRNA gene	Chr4:39589646-39596922 (+)
LP/J	ENSMUSG00230042686	lncRNA gene	Chr4:42893752-42901053 (+)
NOD/ShiLtJ	ENSMUSG00190006298	lncRNA gene	Chr4:39207004-39214202 (+)
NZO/HlLtJ	ENSMUSG00225007324	lncRNA gene	Chr4:47493631-47500839 (+)
PWK/PhJ	ENSLUMG00010006770	lncRNA gene	Chr4:38588669-38595801 (+)
SPRET/EiJ	ENSMSPG00010026155	lncRNA gene	Chr4:39514561-39521919 (+)
WSB/EiJ	ENSIUOG00005049821	lncRNA gene	Chr4:38959644-38966825 (+)

Homology

• Gene Tree
  Gm26881
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  16
• Chemically and radiation induced
  1
• Gene trapped
  15
• Genomic Mutations
  1 involving Gm26881
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  37

• Ensembl
  ENSMUSG00000096974 (Evidence)
• NCBI Gene
  105247120

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096974	Ensembl Gene Model | MGI Sequence Detail	7364	C57BL/6J
transcript	ENSMUST00000266706	Ensembl | MGI Sequence Detail	911	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm26881:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36919	Chr4:43046014-43046043 (+)	131 bp
Tssr36920	Chr4:43046291-43046315 (+)	405 bp