Gm26878 MGI Mouse Gene Detail - MGI:5477372

Sequence Map

Chr8:121606742-121607956 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477372	lncRNA gene	Chr8:121606742-121609220 (+)
129S1/SvImJ	ENSMUSG00200043040	lncRNA gene	Chr8:115948230-115950505 (+)
A/J	ENSMUSG00195027859	lncRNA gene	Chr8:116233354-116235629 (+)
AKR/J	ENSMUSG00220044779	lncRNA gene	Chr8:116423637-116425912 (+)
BALB/cJ	ENSMUSG00180029578	lncRNA gene	Chr8:116279158-116281433 (+)
C3H/HeJ	ENSMUSG00175032044	lncRNA gene	Chr8:116335521-116337796 (+)
C57BL/6NJ	ENSMUSG00215033035	lncRNA gene	Chr8:115909342-115911618 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006726	lincRNA gene	Chr8:112039345-112041615 (+)
CAST/EiJ	ENSTCUG00005035663	lncRNA gene	Chr8:115657755-115660284 (+)
CBA/J	ENSMUSG00210040228	lncRNA gene	Chr8:116262817-116265092 (+)
DBA/2J	ENSMUSG00185038026	lncRNA gene	Chr8:122366808-122369083 (+)
FVB/NJ	ENSMUSG00205038406	lncRNA gene	Chr8:115243852-115246125 (+)
JF1/MsJ	ENSUMUG00000042102	lncRNA gene	Chr8:124659197-124661478 (+)
LP/J	ENSMUSG00230031848	lncRNA gene	Chr8:126001474-126003749 (+)
NOD/ShiLtJ	ENSMUSG00190021779	lncRNA gene	Chr8:116377313-116379588 (+)
NZO/HlLtJ	ENSMUSG00225044160	lncRNA gene	Chr8:129367321-129369596 (+)
PWK/PhJ	ENSLUMG00010041351	lncRNA gene	Chr8:116080048-116082325 (+)
SPRET/EiJ	ENSMSPG00010040469	lncRNA gene	Chr8:118284108-118286400 (+)
WSB/EiJ	ENSIUOG00005030750	lncRNA gene	Chr8:117077737-117080014 (+)

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Phenotype Summary

1 phenotype from 1 allele in 1 genetic background
1 phenotype from multigenic genotypes
1 phenotype reference

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

Mice homozygous for a knock-out allele exhibit early postnatal lethality with low penetrance.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	102636330	NCBI Gene Model \| MGI Sequence Detail	1215	C57BL/6J	± kb
	transcript	AK086813	GenBank \| ENA \| DDBJ \| MGI Sequence Detail	1653	C57BL/6J

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Summaries

All 6

Phenotypes 1
Earliest

J:250380 Szafranski P, et al., CRISPR/Cas9-mediated deletion of lncRNA Gm26878 in the distant Foxf1 enhancer region. Mamm Genome. 2017 Aug;28(7-8):275-282

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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