Gm26877 Gene Detail

Summary

• Symbol
  Gm26877
• Name
  predicted gene, 26877

• Feature Type
  lncRNA gene
• IDs
  MGI:5477371
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:41512552-41524386 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  307 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477371	lncRNA gene	Chr13:41512552-41524386 (+)
129S1/SvImJ	ENSMUSG00200012869	lncRNA gene	Chr13:38786557-38797494 (+)
A/J	ENSMUSG00195034502	lncRNA gene	Chr13:37846447-37857384 (+)
AKR/J	ENSMUSG00220033109	lncRNA gene	Chr13:37633666-37644603 (+)
BALB/cJ	ENSMUSG00180008196	lncRNA gene	Chr13:38152903-38163840 (+)
C3H/HeJ	ENSMUSG00175013701	lncRNA gene	Chr13:38117784-38128721 (+)
C57BL/6NJ	ENSMUSG00215016204	lncRNA gene	Chr13:38254517-38265454 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004951	lincRNA gene	Chr13:36653033-36663598 (+)
CAST/EiJ	ENSTCUG00005036000	lncRNA gene	Chr13:38149236-38160085 (+)
CBA/J	ENSMUSG00210011883	lncRNA gene	Chr13:38123449-38134386 (+)
DBA/2J	ENSMUSG00185033882	lncRNA gene	Chr13:38917781-38928718 (+)
FVB/NJ	ENSMUSG00205033840	lncRNA gene	Chr13:37872647-37883585 (+)
JF1/MsJ	ENSUMUG00000035911	lncRNA gene	Chr13:38455644-38466476 (+)
LP/J	ENSMUSG00230017466	lncRNA gene	Chr13:48255633-48266570 (+)
NOD/ShiLtJ	ENSMUSG00190013162	lncRNA gene	Chr13:38317040-38327977 (+)
NZO/HlLtJ	ENSMUSG00225036784	lncRNA gene	Chr13:42024662-42035599 (+)
PWK/PhJ	ENSLUMG00010029438	lncRNA gene	Chr13:37308613-37319545 (+)
SPRET/EiJ	ENSMSPG00010010737	lncRNA gene	Chr13:37360268-37370433 (+)
WSB/EiJ	ENSIUOG00005030445	lncRNA gene	Chr13:37455719-37466680 (+)

Homology

• Gene Tree
  Gm26877
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Gene trapped
  3
• Genomic Mutations
  1 involving Gm26877
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000097373 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097373	Ensembl Gene Model | MGI Sequence Detail	11835	C57BL/6J
transcript	ENSMUST00000335037	Ensembl | MGI Sequence Detail	664	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14