Gm26812 Gene Detail

Summary

• Symbol
  Gm26812
• Name
  predicted gene, 26812
• Synonyms
  Gm34168

• Feature Type
  lncRNA gene
• IDs
  MGI:5477306
  NCBI Gene: 102637329
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:122576933-122587360 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  265 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477306	lncRNA gene	Chr8:122576933-122602909 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007397	lincRNA gene	Chr8:125368557-125379254 (+)
A/J	MGP_AJ_G0007393	lincRNA gene	Chr8:120166266-120176608 (+)
AKR/J	MGP_AKRJ_G0007365	lincRNA gene	Chr8:123693456-123703795 (+)
BALB/cJ	MGP_BALBcJ_G0007371	lincRNA gene	Chr8:120370346-120380654 (+)
C3H/HeJ	MGP_C3HHeJ_G0007315	lincRNA gene	Chr8:124383692-124395019 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007542	lincRNA gene	Chr8:129546586-129557013 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006735	lincRNA gene	Chr8:112999241-113010072 (+)
CAST/EiJ	MGP_CASTEiJ_G0007218	lincRNA gene	Chr8:124434442-124445726 (+)
CBA/J	MGP_CBAJ_G0007297	lincRNA gene	Chr8:134327527-134337954 (+)
DBA/2J	MGP_DBA2J_G0007320	lincRNA gene	Chr8:119354465-119364944 (+)
FVB/NJ	MGP_FVBNJ_G0007341	lincRNA gene	Chr8:118473664-118484657 (+)
LP/J	MGP_LPJ_G0007402	lincRNA gene	Chr8:125494980-125505506 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007318	lincRNA gene	Chr8:136532422-136544475 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007545	lincRNA gene	Chr8:123858839-123869265 (+)
PWK/PhJ	MGP_PWKPhJ_G0007159	lincRNA gene	Chr8:119168225-119178738 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007066	lincRNA gene	Chr8:122570018-122581662 (+)
WSB/EiJ	MGP_WSBEiJ_G0007278	lincRNA gene	Chr8:124614366-124624939 (+)

Homology

• Gene Tree
  Gm26812
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  3

• Ensembl
  ENSMUSG00000097812 (Evidence)
• NCBI Gene
  102637329

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097812	Ensembl Gene Model | MGI Sequence Detail	10428	C57BL/6J
transcript	ENSMUST00000181776	Ensembl | MGI Sequence Detail	599	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5593327

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26812:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr79829	Chr8:122578069-122578103 (+)	1,153 bp