Gm26800 Gene Detail

Summary

• Symbol
  Gm26800
• Name
  predicted gene, 26800

• Feature Type
  lncRNA gene
• IDs
  MGI:5477294
  NCBI Gene: 105246122
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:57101230-57121778 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  709 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477294	lncRNA gene	Chr16:57099571-57145851 (+)
129S1/SvImJ	ENSMUSG00200021301	lncRNA gene	Chr16:54016218-54016824 (+)
A/J	ENSMUSG00195025587	lncRNA gene	Chr16:53646000-53646606 (+)
AKR/J	ENSMUSG00220020282	lncRNA gene	Chr16:54003031-54003640 (+)
BALB/cJ	ENSMUSG00180024904	lncRNA gene	Chr16:53817893-53818499 (+)
C3H/HeJ	ENSMUSG00175018159	lncRNA gene	Chr16:54094528-54095136 (+)
C57BL/6NJ	ENSMUSG00215024784	lncRNA gene	Chr16:53907669-53908275 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005152	lincRNA gene	Chr16:53661131-53661801 (+)
CAST/EiJ	ENSTCUG00005014645	lncRNA gene	Chr16:54106356-54106959 (+)
CBA/J	ENSMUSG00210019794	lncRNA gene	Chr16:54096986-54097596 (+)
DBA/2J	ENSMUSG00185025765	lncRNA gene	Chr16:53995439-53996045 (+)
FVB/NJ	ENSMUSG00205010689	lncRNA gene	Chr16:53764121-53764728 (+)
JF1/MsJ	ENSUMUG00000026841	lncRNA gene	Chr16:54209729-54210339 (+)
LP/J	ENSMUSG00230009087	lncRNA gene	Chr16:56539849-56540458 (+)
NOD/ShiLtJ	ENSMUSG00190007537	lncRNA gene	Chr16:54016774-54017383 (+)
NZO/HlLtJ	ENSMUSG00225026366	lncRNA gene	Chr16:59638237-59638843 (+)
PWK/PhJ	ENSLUMG00010012047	lncRNA gene	Chr16:54023351-54023961 (+)
SPRET/EiJ	ENSMSPG00010001720	lncRNA gene	Chr16:54530155-54530771 (+)
WSB/EiJ	ENSIUOG00005009398	lncRNA gene	Chr16:54217174-54217783 (+)

Homology

• Gene Tree
  Gm26800
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000097896 (Evidence)
• NCBI Gene
  105246122

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097896	Ensembl Gene Model | MGI Sequence Detail	20549	C57BL/6J
transcript	ENSMUST00000295730	Ensembl | MGI Sequence Detail	431	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22