Gm26756 Gene Detail

Summary

• Symbol
  Gm26756
• Name
  predicted gene, 26756

• Feature Type
  lncRNA gene
• IDs
  MGI:5477250
  NCBI Gene: 102636275
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:67585021-67595333 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  403 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477250	lncRNA gene	Chr5:67585021-67595333 (+)
129S1/SvImJ	ENSMUSG00200036460	lncRNA gene	Chr5:63208814-63219100 (+)
A/J	ENSMUSG00195035667	lncRNA gene	Chr5:62563125-62573409 (+)
AKR/J	ENSMUSG00220004925	lncRNA gene	Chr5:62701023-62711307 (+)
BALB/cJ	ENSMUSG00180024868	lncRNA gene	Chr5:62356041-62366325 (+)
C3H/HeJ	ENSMUSG00175030279	lncRNA gene	Chr5:64383384-64393668 (+)
C57BL/6NJ	ENSMUSG00215006056	lncRNA gene	Chr5:63132447-63142757 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003685	antisense lncRNA gene	Chr5:60730405-60741390 (+)
CAST/EiJ	ENSTCUG00005032413	lncRNA gene	Chr5:62279978-62290237 (+)
CBA/J	ENSMUSG00210023909	lncRNA gene	Chr5:63296246-63306530 (+)
DBA/2J	ENSMUSG00185005719	lncRNA gene	Chr5:65153771-65164055 (+)
FVB/NJ	ENSMUSG00205033403	lncRNA gene	Chr5:62106783-62117067 (+)
JF1/MsJ	ENSUMUG00000021941	lncRNA gene	Chr5:69668115-69678476 (+)
LP/J	ENSMUSG00230009313	lncRNA gene	Chr5:69821346-69831630 (+)
NOD/ShiLtJ	ENSMUSG00190004732	lncRNA gene	Chr5:62287775-62298059 (+)
NZO/HlLtJ	ENSMUSG00225010757	lncRNA gene	Chr5:74927270-74937580 (+)
PWK/PhJ	ENSLUMG00010014068	lncRNA gene	Chr5:62276809-62287165 (+)
SPRET/EiJ	ENSMSPG00010034890	lncRNA gene	Chr5:64062493-64072821 (+)
WSB/EiJ	ENSIUOG00005019344	lncRNA gene	Chr5:65263591-65273873 (+)

Homology

• Gene Tree
  Gm26756
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving Gm26756
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000097840 (Evidence)
• NCBI Gene
  102636275

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097840	Ensembl Gene Model | MGI Sequence Detail	10313	C57BL/6J
transcript	ENSMUST00000181689	Ensembl | MGI Sequence Detail	1294	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 21

  Phenotypes 17
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707

TSS for Gm26756:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr46581	Chr5:67584128-67584144 (+)	-885 bp