Gm26698 Gene Detail

Summary

• Symbol
  Gm26698
• Name
  predicted gene, 26698

• Feature Type
  lncRNA gene
• IDs
  MGI:5477192
  NCBI Gene: 102635544
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:86938174-86939341 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477192	lncRNA gene	Chr12:86938080-86946379 (-)
129S1/SvImJ	ENSMUSG00200051435	lncRNA gene	Chr12:78953734-78954911 (-)
A/J	ENSMUSG00195035835	lncRNA gene	Chr12:81573435-81574613 (-)
AKR/J	ENSMUSG00220050236	lncRNA gene	Chr12:79369328-79370505 (-)
BALB/cJ	ENSMUSG00180027401	lncRNA gene	Chr12:80611187-80612364 (-)
C3H/HeJ	ENSMUSG00175042023	lncRNA gene	Chr12:83704128-83705306 (-)
C57BL/6NJ	ENSMUSG00215046015	lncRNA gene	Chr12:79917610-79918787 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034912	lncRNA gene	Chr12:79887920-79889102 (-)
CBA/J	ENSMUSG00210045804	lncRNA gene	Chr12:80122599-80123775 (-)
DBA/2J	ENSMUSG00185002643	lncRNA gene	Chr12:81974468-81975647 (-)
FVB/NJ	ENSMUSG00205041759	lncRNA gene	Chr12:79788935-79790111 (-)
JF1/MsJ	ENSUMUG00000048612	lncRNA gene	Chr12:85982743-85983911 (-)
LP/J	ENSMUSG00230045662	lncRNA gene	Chr12:89036651-89037829 (-)
NOD/ShiLtJ	ENSMUSG00190047916	lncRNA gene	Chr12:79181807-79182985 (-)
NZO/HlLtJ	ENSMUSG00225052542	lncRNA gene	Chr12:91073679-91074856 (-)
PWK/PhJ	ENSLUMG00010030719	lncRNA gene	Chr12:79993134-79994305 (-)
SPRET/EiJ	ENSMSPG00010001119	lncRNA gene	Chr12:81805130-81806303 (-)
WSB/EiJ	ENSIUOG00005044952	lncRNA gene	Chr12:79842145-79843321 (-)

Homology

• Gene Tree
  Gm26698
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  6
• Genomic Mutations
  1 involving Gm26698
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  1

• Ensembl
  ENSMUSG00000120265 (Evidence)
• NCBI Gene
  102635544

Representative Sequences			Length	Strain/Species
genomic	102635544	NCBI Gene Model | MGI Sequence Detail	1168	C57BL/6J
transcript	NR_166902	RefSeq | MGI Sequence Detail	975	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm26698:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117140	Chr12:86939314-86939343 (-)	12 bp