Gm26688 Gene Detail

Summary

• Symbol
  Gm26688
• Name
  predicted gene, 26688

• Feature Type
  lncRNA gene
• IDs
  MGI:5477182
  NCBI Gene: 102633805
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:40881284-40888638 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477182	lncRNA gene	Chr13:40881284-40888638 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003182	antisense lncRNA gene	Chr13:39189617-39198236 (+)
A/J	MGP_AJ_G0003156	antisense lncRNA gene	Chr13:37881709-37889040 (+)
AKR/J	MGP_AKRJ_G0003138	antisense lncRNA gene	Chr13:38909694-38917055 (+)
BALB/cJ	MGP_BALBcJ_G0003144	antisense lncRNA gene	Chr13:38069508-38076844 (+)
C3H/HeJ	MGP_C3HHeJ_G0003100	antisense lncRNA gene	Chr13:38785268-38793506 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003288	antisense lncRNA gene	Chr13:40440352-40448652 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002816	antisense lncRNA gene	Chr13:36032513-36039900 (+)
CAST/EiJ	MGP_CASTEiJ_G0003068	antisense lncRNA gene	Chr13:38557070-38566402 (+)
CBA/J	MGP_CBAJ_G0003096	antisense lncRNA gene	Chr13:42146227-42155618 (+)
DBA/2J	MGP_DBA2J_G0003102	antisense lncRNA gene	Chr13:37452423-37460074 (+)
FVB/NJ	MGP_FVBNJ_G0003121	antisense lncRNA gene	Chr13:36949169-36957021 (+)
LP/J	MGP_LPJ_G0003177	antisense lncRNA gene	Chr13:39421801-39431024 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003110	antisense lncRNA gene	Chr13:42136144-42144579 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003288	antisense lncRNA gene	Chr13:38552455-38561373 (+)
PWK/PhJ	MGP_PWKPhJ_G0003026	antisense lncRNA gene	Chr13:37528837-37537421 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002971	antisense lncRNA gene	Chr13:37187992-37195087 (+)
WSB/EiJ	MGP_WSBEiJ_G0003100	antisense lncRNA gene	Chr13:38868789-38876188 (+)

Homology

• Gene Tree
  Gm26688
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26688
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097752 (Evidence)
• NCBI Gene
  102633805

Representative Sequences			Length	Strain/Species
genomic	102633805	NCBI Gene Model | MGI Sequence Detail	7355	C57BL/6J
transcript	NR_125899	RefSeq | MGI Sequence Detail	1568	ZRU/MplStud

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm26688:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119371	Chr13:40887607-40887613 (+)	6,326 bp