Gm26688 Gene Detail

Summary

• Symbol
  Gm26688
• Name
  predicted gene, 26688

• Feature Type
  lncRNA gene
• IDs
  MGI:5477182
  NCBI Gene: 102633805
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:40881284-40888638 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477182	lncRNA gene	Chr13:40881284-40888638 (+)
129S1/SvImJ	ENSMUSG00200013094	lncRNA gene	Chr13:38150493-38157853 (+)
A/J	ENSMUSG00195035026	lncRNA gene	Chr13:37211415-37218784 (+)
AKR/J	ENSMUSG00220031408	lncRNA gene	Chr13:36997539-37004904 (+)
BALB/cJ	ENSMUSG00180008271	lncRNA gene	Chr13:37516863-37524228 (+)
C3H/HeJ	ENSMUSG00175014489	lncRNA gene	Chr13:37481763-37489131 (+)
C57BL/6NJ	ENSMUSG00215017652	lncRNA gene	Chr13:37621587-37628944 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002816	antisense lncRNA gene	Chr13:36032513-36039900 (+)
CAST/EiJ	ENSTCUG00005036477	lncRNA gene	Chr13:37539626-37546980 (+)
CBA/J	ENSMUSG00210012072	lncRNA gene	Chr13:37487420-37494786 (+)
DBA/2J	ENSMUSG00185035003	lncRNA gene	Chr13:38281705-38289062 (+)
FVB/NJ	ENSMUSG00205035330	lncRNA gene	Chr13:37233822-37241183 (+)
JF1/MsJ	ENSUMUG00000035149	lncRNA gene	Chr13:37835959-37843311 (+)
LP/J	ENSMUSG00230017933	lncRNA gene	Chr13:47619705-47627068 (+)
NOD/ShiLtJ	ENSMUSG00190013031	lncRNA gene	Chr13:37684258-37691646 (+)
NZO/HlLtJ	ENSMUSG00225036894	lncRNA gene	Chr13:41394726-41402092 (+)
PWK/PhJ	ENSLUMG00010032784	lncRNA gene	Chr13:36672082-36679400 (+)
SPRET/EiJ	ENSMSPG00010011384	lncRNA gene	Chr13:36719132-36726470 (+)
WSB/EiJ	ENSIUOG00005029940	lncRNA gene	Chr13:36828849-36836227 (+)

Homology

• Gene Tree
  Gm26688
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26688
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000097752 (Evidence)
• NCBI Gene
  102633805

Representative Sequences			Length	Strain/Species
genomic	102633805	NCBI Gene Model | MGI Sequence Detail	7355	C57BL/6J
transcript	NR_125899	RefSeq | MGI Sequence Detail	1568	ZRU/MplStud

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm26688:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119371	Chr13:40887607-40887613 (+)	6,326 bp