Gm26672 Gene Detail

Summary

• Symbol
  Gm26672
• Name
  predicted gene, 26672

• Feature Type
  lncRNA gene
• IDs
  MGI:5477166
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:37873452-37901304 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1168 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477166	lncRNA gene	Chr18:37873452-37901304 (-)
129S1/SvImJ	ENSMUSG00200045884	lncRNA gene	Chr18:34878923-34900602 (-)
A/J	ENSMUSG00195037456	lncRNA gene	Chr18:35030068-35051410 (-)
AKR/J	ENSMUSG00220017626	lncRNA gene	Chr18:34999553-35021243 (-)
BALB/cJ	ENSMUSG00180022044	lncRNA gene	Chr18:35479704-35501046 (-)
C3H/HeJ	ENSMUSG00175040721	lncRNA gene	Chr18:34994681-35016189 (-)
C57BL/6NJ	ENSMUSG00215030250	lncRNA gene	Chr18:34749164-34770851 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013494	unclassified non-coding RNA gene	Chr18:34931427-34954080 (-)
CAST/EiJ	ENSTCUG00005024197	lncRNA gene	Chr18:34610288-34631634 (-)
CBA/J	ENSMUSG00210021925	lncRNA gene	Chr18:35021723-35043059 (-)
DBA/2J	ENSMUSG00185021662	lncRNA gene	Chr18:34956352-34977688 (-)
FVB/NJ	ENSMUSG00205033500	lncRNA gene	Chr18:34657874-34679561 (-)
JF1/MsJ	ENSUMUG00000047357	lncRNA gene	Chr18:35091302-35112546 (-)
LP/J	ENSMUSG00230048778	lncRNA gene	Chr18:37073067-37094751 (-)
NOD/ShiLtJ	ENSMUSG00190024036	lncRNA gene	Chr18:34743013-34764515 (-)
NZO/HlLtJ	ENSMUSG00225047499	lncRNA gene	Chr18:36979911-37001599 (-)
PWK/PhJ	ENSLUMG00010012893	lncRNA gene	Chr18:35233702-35255029 (-)
SPRET/EiJ	ENSMSPG00010022473	lncRNA gene	Chr18:35270362-35291738 (-)
WSB/EiJ	ENSIUOG00005008541	lncRNA gene	Chr18:34735736-34757421 (-)

Homology

• Gene Tree
  Gm26672
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  5
• Endonuclease-mediated
  1
• Gene trapped
  3
• Targeted
  1
• Genomic Mutations
  2 involving Gm26672
• Find Mice (IMSR)
  12 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000097330 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097330	Ensembl Gene Model | MGI Sequence Detail	27853	C57BL/6J
transcript	ENSMUST00000180931	Ensembl | MGI Sequence Detail	3602	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)