Gm26665 Gene Detail

Summary

• Symbol
  Gm26665
• Name
  predicted gene, 26665

• Feature Type
  lncRNA gene
• IDs
  MGI:5477159
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:165830529-165865825 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  896 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477159	lncRNA gene	Chr1:165830529-165865825 (+)
129S1/SvImJ	ENSMUSG00200047922	lncRNA gene	Chr1:163332272-163367572 (+)
A/J	ENSMUSG00195049186	lncRNA gene	Chr1:162640896-162676211 (+)
AKR/J	ENSMUSG00220014644	lncRNA gene	Chr1:162429424-162464726 (+)
BALB/cJ	ENSMUSG00180042182	lncRNA gene	Chr1:162886245-162921557 (+)
C3H/HeJ	ENSMUSG00175045211	lncRNA gene	Chr1:162982030-163017338 (+)
C57BL/6NJ	ENSMUSG00215041950	lncRNA gene	Chr1:162767937-162803248 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004554	lincRNA gene	Chr1:156408904-156446169 (+)
CAST/EiJ	ENSTCUG00005020953	lncRNA gene	Chr1:161399022-161434150 (+)
CBA/J	ENSMUSG00210021705	lncRNA gene	Chr1:162856471-162891781 (+)
DBA/2J	ENSMUSG00185012039	lncRNA gene	Chr1:167101075-167136800 (+)
FVB/NJ	ENSMUSG00205010547	lncRNA gene	Chr1:161901157-161936434 (+)
JF1/MsJ	ENSUMUG00000011925	lncRNA gene	Chr1:166252213-166287925 (+)
LP/J	ENSMUSG00230026655	lncRNA gene	Chr1:166721292-166756597 (+)
NOD/ShiLtJ	ENSMUSG00190041009	lncRNA gene	Chr1:162687224-162722519 (+)
NZO/HlLtJ	ENSMUSG00225004839	lncRNA gene	Chr1:170307141-170342440 (+)
PWK/PhJ	ENSLUMG00010045223	lncRNA gene	Chr1:161622311-161658329 (+)
SPRET/EiJ	ENSMSPG00010049278	lncRNA gene	Chr1:165126801-165162960 (+)
WSB/EiJ	ENSIUOG00005016065	lncRNA gene	Chr1:162167903-162203216 (+)

Homology

• Gene Tree
  Gm26665
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Gene trapped
  2
• Genomic Mutations
  2 involving Gm26665
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000097196 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097196	Ensembl Gene Model | MGI Sequence Detail	35297	C57BL/6J
transcript	ENSMUST00000181378	Ensembl | MGI Sequence Detail	839	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9