Gm26664 Gene Detail

Summary

• Symbol
  Gm26664
• Name
  predicted gene, 26664

• Feature Type
  lncRNA gene
• IDs
  MGI:5477158
  NCBI Gene: 102635622
• Alliance
  genome feature page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr8:85390719-85404386 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  263 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477158	lncRNA gene	Chr8:85390719-85404386 (+)
129S1/SvImJ	ENSMUSG00200026365	lncRNA gene	Chr8:79756677-79761035 (+)
A/J	ENSMUSG00195019140	lncRNA gene	Chr8:80114686-80119058 (+)
AKR/J	ENSMUSG00220023692	lncRNA gene	Chr8:80156213-80160586 (+)
BALB/cJ	ENSMUSG00180022277	lncRNA gene	Chr8:79955357-79959730 (+)
C3H/HeJ	ENSMUSG00175011621	lncRNA gene	Chr8:80050383-80054755 (+)
C57BL/6NJ	ENSMUSG00215027578	lncRNA gene	Chr8:79687880-79692206 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038857	lncRNA gene	Chr8:79564947-79569299 (+)
CBA/J	ENSMUSG00210020694	lncRNA gene	Chr8:80037509-80041881 (+)
DBA/2J	ENSMUSG00185038253	lncRNA gene	Chr8:86146094-86150466 (+)
FVB/NJ	ENSMUSG00205040027	lncRNA gene	Chr8:79093328-79097700 (+)
JF1/MsJ	ENSUMUG00000036002	lncRNA gene	Chr8:88454444-88458769 (+)
LP/J	ENSMUSG00230030361	lncRNA gene	Chr8:89753693-89758066 (+)
NOD/ShiLtJ	ENSMUSG00190030288	lncRNA gene	Chr8:80111645-80116017 (+)
NZO/HlLtJ	ENSMUSG00225040912	lncRNA gene	Chr8:93148591-93152916 (+)
PWK/PhJ	ENSLUMG00010031117	lncRNA gene	Chr8:79792016-79796347 (+)
SPRET/EiJ	ENSMSPG00010030873	lncRNA gene	Chr8:81707503-81711839 (+)
WSB/EiJ	ENSIUOG00005016521	lncRNA gene	Chr8:80851984-80856356 (+)

Homology

• Gene Tree
  Gm26664
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  34 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  3
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm26664
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  39
• RefSeq
  1

• Ensembl
  ENSMUSG00000120095 (Evidence)
• NCBI Gene
  102635622

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120095	Ensembl Gene Model | MGI Sequence Detail	13668	C57BL/6J
transcript	ENSMUST00000241510	Ensembl | MGI Sequence Detail	1958	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 37

  Phenotypes 34
• Earliest
  J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
• Latest
  J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12

TSS for Gm26664:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78424	Chr8:85389628-85389635 (+)	-1,087 bp
Tssr78425	Chr8:85390840-85390867 (+)	135 bp
Tssr78426	Chr8:85390872-85390886 (+)	160 bp
Tssr78427	Chr8:85391167-85391194 (+)	462 bp
Tssr78428	Chr8:85403035-85403062 (+)	12,330 bp