Gm26646 Gene Detail

Summary

• Symbol
  Gm26646
• Name
  predicted gene, 26646

• Feature Type
  lncRNA gene
• IDs
  MGI:5477140
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:79566685-79570389 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  204 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477140	lncRNA gene	Chr7:79566685-79570389 (+)
129S1/SvImJ	ENSMUSG00200034823	lncRNA gene	Chr7:66382893-66386597 (+)
A/J	ENSMUSG00195014625	lncRNA gene	Chr7:70796535-70800240 (+)
AKR/J	ENSMUSG00220040933	lncRNA gene	Chr7:64338566-64342270 (+)
BALB/cJ	ENSMUSG00180013701	lncRNA gene	Chr7:67521669-67525373 (+)
C3H/HeJ	ENSMUSG00175021737	lncRNA gene	Chr7:68294967-68298671 (+)
C57BL/6NJ	ENSMUSG00215035339	lncRNA gene	Chr7:67392432-67396136 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004039	antisense lncRNA gene	Chr7:82471011-82474743 (+)
CAST/EiJ	ENSTCUG00005046208	lncRNA gene	Chr7:70842471-70846184 (+)
CBA/J	ENSMUSG00210024112	lncRNA gene	Chr7:68146249-68149953 (+)
DBA/2J	ENSMUSG00185048781	lncRNA gene	Chr7:72468973-72472677 (+)
FVB/NJ	ENSMUSG00205027547	lncRNA gene	Chr7:68033908-68037613 (+)
JF1/MsJ	ENSUMUG00000031801	lncRNA gene	Chr7:77126619-77130320 (+)
LP/J	ENSMUSG00230016340	lncRNA gene	Chr7:78558557-78562261 (+)
NOD/ShiLtJ	ENSMUSG00190019605	lncRNA gene	Chr7:68286250-68289954 (+)
NZO/HlLtJ	ENSMUSG00225042464	lncRNA gene	Chr7:76798557-76802262 (+)
PWK/PhJ	ENSLUMG00010017881	lncRNA gene	Chr7:66719223-66723153 (+)
SPRET/EiJ	ENSMSPG00010026263	lncRNA gene	Chr7:67128858-67132546 (+)
WSB/EiJ	ENSIUOG00005023630	lncRNA gene	Chr7:68632990-68636694 (+)

Homology

• Gene Tree
  Gm26646
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm26646
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000097685 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097685	Ensembl Gene Model | MGI Sequence Detail	3705	C57BL/6J
transcript	ENSMUST00000180715	Ensembl | MGI Sequence Detail	1490	Not Applicable

References

• Summaries
  All 13

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67