Gm26618 Gene Detail

Summary

• Symbol
  Gm26618
• Name
  predicted gene, 26618

• Feature Type
  lncRNA gene
• IDs
  MGI:5477112
  NCBI Gene: 102636641
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:5939110-6004323 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477112	lncRNA gene	ChrX:5926381-6004607 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037120	sense overlapping lncRNA gene	ChrX:634545-701396 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0037055	sense overlapping lncRNA gene	ChrX:653275-719154 (-)
BALB/cJ	MGP_BALBcJ_G0037098	sense overlapping lncRNA gene	ChrX:642727-708748 (-)
C3H/HeJ	MGP_C3HHeJ_G0036785	sense overlapping lncRNA gene	ChrX:638259-709096 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0035972	sense overlapping lncRNA gene	ChrX:564270-637490 (-)
CBA/J	MGP_CBAJ_G0036760	sense overlapping lncRNA gene	ChrX:738467-804640 (-)
DBA/2J	MGP_DBA2J_G0036935	sense overlapping lncRNA gene	ChrX:659094-726370 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0036982	sense overlapping lncRNA gene	ChrX:648638-706861 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036893	sense overlapping lncRNA gene	ChrX:678396-757385 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037729	sense overlapping lncRNA gene	ChrX:606440-679164 (-)
PWK/PhJ	MGP_PWKPhJ_G0035666	sense overlapping lncRNA gene	ChrX:594089-664806 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035472	sense overlapping lncRNA gene	ChrX:559317-637004 (-)
WSB/EiJ	MGP_WSBEiJ_G0036174	sense overlapping lncRNA gene	ChrX:644420-711222 (-)

Homology

• Gene Tree
  Gm26618
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  3

• Ensembl
  ENSMUSG00000097342 (Evidence)
• NCBI Gene
  102636641

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097342	Ensembl Gene Model | MGI Sequence Detail	65214	C57BL/6J
transcript	ENSMUST00000181123	Ensembl | MGI Sequence Detail	497	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;