Gm26594 Gene Detail

Summary

• Symbol
  Gm26594
• Name
  predicted gene, 26594

• Feature Type
  lncRNA gene
• IDs
  MGI:5477088
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:95763231-95771505 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  283 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477088	lncRNA gene	Chr3:95763231-95771505 (+)
129S1/SvImJ	ENSMUSG00200044606	lncRNA gene	Chr3:92422291-92427810 (+)
A/J	ENSMUSG00195048370	lncRNA gene	Chr3:92746545-92752066 (+)
AKR/J	ENSMUSG00220041927	lncRNA gene	Chr3:91133609-91139126 (+)
BALB/cJ	ENSMUSG00180044113	lncRNA gene	Chr3:92746013-92751537 (+)
C3H/HeJ	ENSMUSG00175030368	lncRNA gene	Chr3:92390200-92395719 (+)
C57BL/6NJ	ENSMUSG00215036349	lncRNA gene	Chr3:93109064-93114588 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005679	lincRNA gene	Chr3:89936167-89941623 (+)
CAST/EiJ	ENSTCUG00005048320	lncRNA gene	Chr3:92942581-92948072 (+)
CBA/J	ENSMUSG00210051651	lncRNA gene	Chr3:92927671-92933190 (+)
DBA/2J	ENSMUSG00185044475	lncRNA gene	Chr3:93344765-93350284 (+)
FVB/NJ	ENSMUSG00205050926	lncRNA gene	Chr3:92040992-92046513 (+)
JF1/MsJ	ENSUMUG00000047811	lncRNA gene	Chr3:92236917-92242377 (+)
LP/J	ENSMUSG00230045246	lncRNA gene	Chr3:95285701-95291219 (+)
NOD/ShiLtJ	ENSMUSG00190048556	lncRNA gene	Chr3:93452829-93458351 (+)
NZO/HlLtJ	ENSMUSG00225012412	lncRNA gene	Chr3:97707738-97713258 (+)
PWK/PhJ	ENSLUMG00010052397	lncRNA gene	Chr3:92216915-92222376 (+)
SPRET/EiJ	ENSMSPG00010046276	lncRNA gene	Chr3:92520004-92525760 (+)
WSB/EiJ	ENSIUOG00005031732	lncRNA gene	Chr3:92865931-92871446 (+)

Homology

• Gene Tree
  Gm26594
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Gene trapped
  5
• Genomic Mutations
  1 involving Gm26594
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000097189 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097189	Ensembl Gene Model | MGI Sequence Detail	8275	C57BL/6J
transcript	ENSMUST00000180383	Ensembl | MGI Sequence Detail	1094	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9