Gm26576 Gene Detail

Summary

• Symbol
  Gm26576
• Name
  predicted gene, 26576

• Feature Type
  lncRNA gene
• IDs
  MGI:5477070
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:66753756-66759378 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  241 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477070	lncRNA gene	Chr10:66753756-66759378 (+)
129S1/SvImJ	ENSMUSG00200017843	lncRNA gene	Chr10:63452429-63455728 (+)
A/J	ENSMUSG00195005774	lncRNA gene	Chr10:63746604-63749903 (+)
AKR/J	ENSMUSG00220029177	lncRNA gene	Chr10:63415443-63418741 (+)
BALB/cJ	ENSMUSG00180007824	lncRNA gene	Chr10:63781136-63784435 (+)
C3H/HeJ	ENSMUSG00175013353	lncRNA gene	Chr10:63615816-63619115 (+)
C57BL/6NJ	ENSMUSG00215003999	lncRNA gene	Chr10:63390689-63393986 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004648	lincRNA gene	Chr10:61124033-61126763 (+)
CAST/EiJ	ENSTCUG00005027596	lncRNA gene	Chr10:63351367-63354657 (+)
CBA/J	ENSMUSG00210010017	lncRNA gene	Chr10:63495648-63498948 (+)
DBA/2J	ENSMUSG00185020421	lncRNA gene	Chr10:63858419-63861717 (+)
FVB/NJ	ENSMUSG00205007619	lncRNA gene	Chr10:63562089-63565377 (+)
JF1/MsJ	ENSUMUG00000023133	lncRNA gene	Chr10:65057865-65061189 (+)
LP/J	ENSMUSG00230020253	lncRNA gene	Chr10:65624459-65627742 (+)
NOD/ShiLtJ	ENSMUSG00190008270	lncRNA gene	Chr10:63856567-63859851 (+)
NZO/HlLtJ	ENSMUSG00225045339	lncRNA gene	Chr10:69913138-69916436 (+)
PWK/PhJ	ENSLUMG00010008212	lncRNA gene	Chr10:63449500-63452793 (+)
SPRET/EiJ	ENSMSPG00010023722	lncRNA gene	Chr10:65104881-65108210 (+)
WSB/EiJ	ENSIUOG00005033779	lncRNA gene	Chr10:63382488-63385773 (+)

Homology

• Gene Tree
  Gm26576
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  16
• Chemically induced (other)
  1
• Gene trapped
  14
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm26576
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000097921 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097921	Ensembl Gene Model | MGI Sequence Detail	5623	C57BL/6J
transcript	ENSMUST00000181018	Ensembl | MGI Sequence Detail	1977	Not Applicable

References

• Summaries
  All 11

  Phenotypes 9
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9