Gm26568 Gene Detail

Summary

• Symbol
  Gm26568
• Name
  predicted gene, 26568

• Feature Type
  lncRNA gene
• IDs
  MGI:5477062
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:136143761-136152817 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  325 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477062	lncRNA gene	Chr1:136143761-136152817 (+)
129S1/SvImJ	ENSMUSG00200008870	lncRNA gene	Chr1:133768146-133777143 (+)
A/J	ENSMUSG00195017099	lncRNA gene	Chr1:132831374-132840367 (+)
AKR/J	ENSMUSG00220003688	lncRNA gene	Chr1:132722236-132731229 (+)
BALB/cJ	ENSMUSG00180011533	lncRNA gene	Chr1:133371931-133380924 (+)
C3H/HeJ	ENSMUSG00175006669	lncRNA gene	Chr1:133075415-133084404 (+)
C57BL/6NJ	ENSMUSG00215020700	lncRNA gene	Chr1:133073771-133082764 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002406	antisense lncRNA gene	Chr1:127831692-127840646 (+)
CAST/EiJ	ENSTCUG00005038461	lncRNA gene	Chr1:132008031-132016995 (+)
CBA/J	ENSMUSG00210014510	lncRNA gene	Chr1:133005728-133014721 (+)
DBA/2J	ENSMUSG00185032533	lncRNA gene	Chr1:137382993-137391986 (+)
FVB/NJ	ENSMUSG00205002802	lncRNA gene	Chr1:132341448-132350441 (+)
JF1/MsJ	ENSUMUG00000051483	lncRNA gene	Chr1:136510329-136519287 (+)
LP/J	ENSMUSG00230040103	lncRNA gene	Chr1:136906524-136915517 (+)
NOD/ShiLtJ	ENSMUSG00190003075	lncRNA gene	Chr1:133019737-133028730 (+)
NZO/HlLtJ	ENSMUSG00225020828	lncRNA gene	Chr1:140673502-140682495 (+)
PWK/PhJ	ENSLUMG00010002151	lncRNA gene	Chr1:132134097-132143064 (+)
SPRET/EiJ	ENSMSPG00010012347	lncRNA gene	Chr1:134935051-134943927 (+)
WSB/EiJ	ENSIUOG00005028683	lncRNA gene	Chr1:132789453-132798439 (+)

Homology

• Gene Tree
  Gm26568
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm26568
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000097315 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097315	Ensembl Gene Model | MGI Sequence Detail	9057	C57BL/6J
transcript	ENSMUST00000180496	Ensembl | MGI Sequence Detail	1653	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm26568:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9051	Chr1:136148468-136148472 (+)	4,709 bp