Gm26543 Gene Detail

Summary

• Symbol
  Gm26543
• Name
  predicted gene, 26543

• Feature Type
  lncRNA gene
• IDs
  MGI:5477037
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:49095518-49101749 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  206 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477037	lncRNA gene	Chr10:49095518-49101749 (-)
129S1/SvImJ	ENSMUSG00200007667	lncRNA gene	Chr10:45988483-45994714 (-)
A/J	ENSMUSG00195003311	lncRNA gene	Chr10:46266246-46272479 (-)
AKR/J	ENSMUSG00220006828	lncRNA gene	Chr10:45947435-45953668 (-)
BALB/cJ	ENSMUSG00180012691	lncRNA gene	Chr10:46388109-46394330 (-)
C3H/HeJ	ENSMUSG00175010647	lncRNA gene	Chr10:46137415-46143648 (-)
C57BL/6NJ	ENSMUSG00215002458	lncRNA gene	Chr10:45892912-45899143 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008904	lncRNA gene	Chr10:46150108-46155723 (-)
CBA/J	ENSMUSG00210008495	lncRNA gene	Chr10:46040540-46046775 (-)
DBA/2J	ENSMUSG00185003295	lncRNA gene	Chr10:46196706-46202937 (-)
FVB/NJ	ENSMUSG00205005504	lncRNA gene	Chr10:46101365-46107596 (-)
JF1/MsJ	ENSUMUG00000030134	lncRNA gene	Chr10:45897135-45902753 (-)
LP/J	ENSMUSG00230006531	lncRNA gene	Chr10:47998423-48004654 (-)
NOD/ShiLtJ	ENSMUSG00190005731	lncRNA gene	Chr10:46351452-46357683 (-)
NZO/HlLtJ	ENSMUSG00225022891	lncRNA gene	Chr10:52279366-52285597 (-)
PWK/PhJ	ENSLUMG00010005090	lncRNA gene	Chr10:46014591-46020196 (-)
SPRET/EiJ	ENSMSPG00010013932	lncRNA gene	Chr10:47151508-47157133 (-)
WSB/EiJ	ENSIUOG00005015157	lncRNA gene	Chr10:45956656-45962885 (-)

Homology

• Gene Tree
  Gm26543
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm26543
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000097884 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097884	Ensembl Gene Model | MGI Sequence Detail	6232	C57BL/6J
transcript	ENSMUST00000180729	Ensembl | MGI Sequence Detail	2221	Not Applicable

References

• Summaries
  All 7

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87