Gm26401 Gene Detail

Summary

• Symbol
  Gm26401
• Name
  predicted gene, 26401

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5456178
  NCBI Gene: 115489239
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:7096014-7096089 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  5 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456178	snoRNA gene	ChrX:7096010-7096089 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039572	snoRNA gene	ChrX:1818148-1818223 (+)
A/J	MGP_AJ_G0039571	snoRNA gene	ChrX:1792599-1792674 (+)
AKR/J	MGP_AKRJ_G0039494	snoRNA gene	ChrX:1872000-1872075 (+)
BALB/cJ	MGP_BALBcJ_G0039549	snoRNA gene	ChrX:1819792-1819867 (+)
C3H/HeJ	MGP_C3HHeJ_G0039209	snoRNA gene	ChrX:1863971-1864046 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040101	snoRNA gene	ChrX:1895535-1895610 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036745	snoRNA gene	ChrX:1366701-1366776 (+)
CAST/EiJ	MGP_CASTEiJ_G0038336	snoRNA gene	ChrX:1753204-1753279 (+)
CBA/J	MGP_CBAJ_G0039176	snoRNA gene	ChrX:1994322-1994397 (+)
DBA/2J	MGP_DBA2J_G0039370	snoRNA gene	ChrX:1824762-1824837 (+)
FVB/NJ	MGP_FVBNJ_G0039324	snoRNA gene	ChrX:1784976-1785051 (+)
LP/J	MGP_LPJ_G0039410	snoRNA gene	ChrX:1826982-1827057 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039327	snoRNA gene	ChrX:1962312-1962387 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040198	snoRNA gene	ChrX:1811284-1811359 (+)
PWK/PhJ	MGP_PWKPhJ_G0038014	snoRNA gene	ChrX:1743900-1743975 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037766	snoRNA gene	ChrX:1765301-1765376 (+)
WSB/EiJ	MGP_WSBEiJ_G0038562	snoRNA gene	ChrX:1818531-1818606 (+)

Homology

• Gene Tree
  Gm26401
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000089127 (Evidence)
• NCBI Gene
  115489239

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089127	Ensembl Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	ENSMUST00000158502	Ensembl | MGI Sequence Detail	76	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;