Gm26377 Gene Detail

Summary

• Symbol
  Gm26377
• Name
  predicted gene, 26377

• Feature Type
  miRNA gene
• IDs
  MGI:5456154
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:78385810-78385917 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456154	miRNA gene	Chr9:78385810-78385917 (-)
129S1/SvImJ	ENSMUSG00200019830	miRNA gene	Chr9:75536630-75536737 (-)
A/J	ENSMUSG00195010965	miRNA gene	Chr9:75320853-75320960 (-)
AKR/J	ENSMUSG00220015350	miRNA gene	Chr9:75427160-75427267 (-)
BALB/cJ	ENSMUSG00180018644	miRNA gene	Chr9:75434390-75434497 (-)
C3H/HeJ	ENSMUSG00175012199	miRNA gene	Chr9:75493244-75493351 (-)
C57BL/6NJ	ENSMUSG00215016284	miRNA gene	Chr9:75372595-75372702 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008285	miRNA gene	Chr9:75485105-75485213 (-)
CAST/EiJ	ENSTCUG00005016630	miRNA gene	Chr14:88443383-88443552 (-)
CAST/EiJ	ENSTCUG00005010169	miRNA gene	Chr9:75072436-75072544 (-)
CAST/EiJ	ENSTCUG00005007392	miRNA gene	Chr15:57158764-57158918 (+)
CBA/J	ENSMUSG00210013352	miRNA gene	Chr9:75526163-75526270 (-)
DBA/2J	ENSMUSG00185008591	miRNA gene	Chr9:75554479-75554586 (-)
FVB/NJ	ENSMUSG00205030648	miRNA gene	Chr9:75715194-75715301 (-)
JF1/MsJ	ENSUMUG00000039947	miRNA gene	Chr9:75463265-75463371 (-)
LP/J	ENSMUSG00230025835	miRNA gene	Chr9:75688221-75688328 (-)
NOD/ShiLtJ	ENSMUSG00190038866	miRNA gene	Chr9:75630564-75630671 (-)
NZO/HlLtJ	ENSMUSG00225025659	miRNA gene	Chr9:75852428-75852535 (-)
PWK/PhJ	ENSLUMG00010016892	miRNA gene	Chr9:75395898-75396004 (-)
SPRET/EiJ	ENSMSPG00010009762	miRNA gene	Chr14:90404263-90404414 (-)
SPRET/EiJ	ENSMSPG00010026538	miRNA gene	Chr12:103629771-103629889 (+)
SPRET/EiJ	ENSMSPG00010004077	miRNA gene	Chr9:76622333-76622442 (-)
SPRET/EiJ	ENSMSPG00010034908	miRNA gene	ChrX:77435345-77435460 (+)
WSB/EiJ	ENSIUOG00005025767	miRNA gene	Chr9:74959773-74959880 (-)

Homology

• Gene Tree
  Gm26377
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm26377
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000076138 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000076138	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00000102184	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75

TSS for Gm26377:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr90644	Chr9:78386330-78386350 (-)	-423 bp