Gm25929 Gene Detail

Summary

• Symbol
  Gm25929
• Name
  predicted gene, 25929

• Feature Type
  snRNA gene
• IDs
  MGI:5455706
  NCBI Gene: 115487940
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:61225587-61225693 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455706	snRNA gene	Chr11:61225587-61225693 (+)
129S1/SvImJ	ENSMUSG00200037411	snRNA gene	Chr11:58150434-58150540 (+)
A/J	ENSMUSG00195043444	snRNA gene	Chr11:58184877-58184983 (+)
AKR/J	ENSMUSG00220050858	snRNA gene	Chr11:58292567-58292673 (+)
BALB/cJ	ENSMUSG00180051376	snRNA gene	Chr11:58237977-58238083 (+)
C3H/HeJ	ENSMUSG00175049218	snRNA gene	Chr11:58202112-58202218 (+)
C57BL/6NJ	ENSMUSG00215040224	snRNA gene	Chr11:57945046-57945152 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047520	snRNA gene	Chr11:57737728-57737834 (+)
CBA/J	ENSMUSG00210042808	snRNA gene	Chr11:58035157-58035263 (+)
DBA/2J	ENSMUSG00185028049	snRNA gene	Chr11:113023202-113023308 (-)
DBA/2J	ENSMUSG00185044581	snRNA gene	Chr11:58224622-58224728 (+)
FVB/NJ	ENSMUSG00205050920	snRNA gene	Chr11:58109842-58109948 (+)
JF1/MsJ	ENSUMUG00000052910	snRNA gene	Chr11:58632944-58633050 (+)
LP/J	ENSMUSG00230050468	snRNA gene	Chr11:59371731-59371837 (+)
NOD/ShiLtJ	ENSMUSG00190051907	snRNA gene	Chr11:58218827-58218933 (+)
NZO/HlLtJ	ENSMUSG00225048406	snRNA gene	Chr11:61515057-61515163 (+)
PWK/PhJ	ENSLUMG00010023414	snRNA gene	Chr1:14292779-14292885 (-)
PWK/PhJ	ENSLUMG00010035399	snRNA gene	Chr11:58155659-58155765 (+)
SPRET/EiJ	ENSMSPG00010042564	snRNA gene	Chr11:58826317-58826423 (+)
WSB/EiJ	ENSIUOG00005039771	snRNA gene	Chr11:58142428-58142534 (+)

Homology

• Gene Tree
  Gm25929
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm25929
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  5
• GO References
  1

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000119377 (Evidence)
• NCBI Gene
  115487940

Representative Sequences			Length	Strain/Species
genomic	115487940	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004937395	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 14

  Diseases 2

  Gene Ontology 1

  Phenotypes 10
• Earliest
  J:83302 Walz K, et al., Modeling del(17)(p11.2p11.2) and dup(17)(p11.2p11.2) contiguous gene syndromes by chromosome engineering in mice: phenotypic consequences of gene dosage imbalance. Mol Cell Biol. 2003 May;23(10):3646-55
• Latest
  J:185284 Lacaria M, et al., Enriched rearing improves behavioral responses of an animal model for CNV-based autistic-like traits. Hum Mol Genet. 2012 Jul 15;21(14):3083-96