Gm25890 Gene Detail

Summary

• Symbol
  Gm25890
• Name
  predicted gene, 25890

• Feature Type
  snRNA gene
• IDs
  MGI:5455667
  NCBI Gene: 115489767
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:96393871-96394035 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  52 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455667	snRNA gene	Chr3:96393871-96394035 (-)
129S1/SvImJ	ENSMUSG00200045637	snRNA gene	Chr3:93034476-93034640 (-)
A/J	ENSMUSG00195049619	snRNA gene	Chr3:93430753-93430917 (-)
AKR/J	ENSMUSG00220041226	snRNA gene	Chr3:91771659-91771823 (-)
BALB/cJ	ENSMUSG00180042166	snRNA gene	Chr3:93379597-93379761 (-)
C3H/HeJ	ENSMUSG00175030757	snRNA gene	Chr3:92989183-92989347 (-)
C57BL/6NJ	ENSMUSG00215038403	snRNA gene	Chr3:93749059-93749223 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020484	snRNA gene	Chr3:93580616-93580780 (-)
CBA/J	ENSMUSG00210051469	snRNA gene	Chr3:93542213-93542377 (-)
DBA/2J	ENSMUSG00185047945	snRNA gene	Chr3:93990082-93990246 (-)
FVB/NJ	ENSMUSG00205050459	snRNA gene	Chr3:92650590-92650754 (-)
JF1/MsJ	ENSUMUG00000047628	snRNA gene	Chr3:92845811-92845975 (-)
LP/J	ENSMUSG00230046022	snRNA gene	Chr3:95966324-95966488 (-)
NOD/ShiLtJ	ENSMUSG00190047253	snRNA gene	Chr3:94095037-94095201 (-)
NZO/HlLtJ	ENSMUSG00225012314	snRNA gene	Chr3:98344845-98345009 (-)
NZO/HlLtJ	ENSMUSG00225005562	snRNA gene	Chr1:175324912-175325075 (+)
PWK/PhJ	ENSLUMG00010029482	snRNA gene	Chr3:92838424-92838588 (-)
SPRET/EiJ	ENSMSPG00010046458	snRNA gene	Chr3:93136047-93136211 (-)
WSB/EiJ	ENSIUOG00005035137	snRNA gene	Chr3:93489125-93489289 (-)

Homology

• Gene Tree
  Gm25890
  

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000118698 (Evidence)
• NCBI Gene
  115489767

Representative Sequences			Length	Strain/Species
genomic	115489767	NCBI Gene Model | MGI Sequence Detail	165	C57BL/6J
transcript	XR_004941651	RefSeq | MGI Sequence Detail	165	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;