Gm25829 Gene Detail

Summary

• Symbol
  Gm25829
• Name
  predicted gene, 25829

• Feature Type
  snRNA gene
• IDs
  MGI:5455606
  NCBI Gene: 115487701
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:54288261-54288367 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  64 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455606	snRNA gene	Chr1:54288261-54288367 (-)
129S1/SvImJ	ENSMUSG00200019173	snRNA gene	Chr1:51763412-51763518 (-)
A/J	ENSMUSG00195031249	snRNA gene	Chr1:51306759-51306865 (-)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175001222	snRNA gene	Chr1:51694738-51694844 (-)
C57BL/6NJ	ENSMUSG00215035781	snRNA gene	Chr1:51616715-51616821 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014585	snRNA gene	Chr1:51530145-51530250 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205004302	snRNA gene	Chr10:99049679-99049785 (+)
FVB/NJ	ENSMUSG00205025340	snRNA gene	Chr18:26502962-26503068 (-)
FVB/NJ	ENSMUSG00205024709	snRNA gene	Chr1:51346242-51346348 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230029289	snRNA gene	Chr1:52510354-52510460 (-)
LP/J	ENSMUSG00230055279	snRNA gene	Chr17:21659488-21659594 (-)
LP/J	ENSMUSG00230013289	snRNA gene	Chr13:128910157-128910263 (+)
LP/J	ENSMUSG00230030091	snRNA gene	Chr19:26735012-26735118 (+)
NOD/ShiLtJ	ENSMUSG00190041754	snRNA gene	Chr1:51529174-51529280 (-)
NOD/ShiLtJ	ENSMUSG00190030072	snRNA gene	Chr16:87073679-87073785 (-)
NZO/HlLtJ	ENSMUSG00225009718	snRNA gene	Chr1:55716731-55716837 (-)
NZO/HlLtJ	ENSMUSG00225031995	snRNA gene	Chr16:92752404-92752510 (-)
NZO/HlLtJ	ENSMUSG00225000535	snRNA gene	Chr1:112030096-112030202 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm25829
  

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119657 (Evidence)
• NCBI Gene
  115487701

Representative Sequences			Length	Strain/Species
genomic	115487701	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004936883	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;