Gm25796 Gene Detail

Summary

• Symbol
  Gm25796
• Name
  predicted gene, 25796

• Feature Type
  snRNA gene
• IDs
  MGI:5455573
  NCBI Gene: 115489856
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:45772171-45772333 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455573	snRNA gene	Chr3:45772171-45772335 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037796	snRNA gene	Chr3:44018779-44018941 (+)
A/J	MGP_AJ_G0037784	snRNA gene	Chr3:42839458-42839620 (+)
AKR/J	MGP_AKRJ_G0037722	snRNA gene	Chr3:43688800-43688962 (+)
BALB/cJ	MGP_BALBcJ_G0037765	snRNA gene	Chr3:42670855-42671017 (+)
C3H/HeJ	MGP_C3HHeJ_G0037440	snRNA gene	Chr3:43823876-43824038 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038293	snRNA gene	Chr3:45854144-45854306 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035197	snRNA gene	Chr3:39959198-39959360 (+)
CAST/EiJ	MGP_CASTEiJ_G0036603	snRNA gene	Chr3:43776905-43777067 (+)
CBA/J	MGP_CBAJ_G0037414	snRNA gene	Chr3:47129182-47129344 (+)
DBA/2J	MGP_DBA2J_G0037595	snRNA gene	Chr3:42485101-42485263 (+)
FVB/NJ	MGP_FVBNJ_G0037544	snRNA gene	Chr3:41604783-41604945 (+)
LP/J	MGP_LPJ_G0037647	snRNA gene	Chr3:44765493-44765655 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037557	snRNA gene	Chr3:50552013-50552175 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038404	snRNA gene	Chr3:43589915-43590077 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0036078	snRNA gene	Chr3:43187598-43187759 (+)
WSB/EiJ	MGP_WSBEiJ_G0036817	snRNA gene	Chr3:43608688-43608850 (+)

Homology

• Gene Tree
  Gm25796
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000064579 (Evidence)
• NCBI Gene
  115489856

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000064579	Ensembl Gene Model | MGI Sequence Detail	163	C57BL/6J
transcript	ENSMUST00000082645	Ensembl | MGI Sequence Detail	163	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;