Gm25653 Gene Detail

Summary

• Symbol
  Gm25653
• Name
  predicted gene, 25653

• Feature Type
  snoRNA gene
• IDs
  MGI:5455430
  NCBI Gene: 115486284
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:72824438-72824575 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  40 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455430	snoRNA gene	Chr4:72824438-72824575 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039193	snoRNA gene	Chr4:72126561-72126693 (-)
A/J	MGP_AJ_G0039189	snoRNA gene	Chr4:69690756-69690893 (-)
AKR/J	MGP_AKRJ_G0039120	snoRNA gene	Chr4:71482224-71482361 (-)
BALB/cJ	MGP_BALBcJ_G0039172	snoRNA gene	Chr4:69833856-69833993 (-)
C3H/HeJ	MGP_C3HHeJ_G0038833	snoRNA gene	Chr4:72029352-72029489 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039720	snoRNA gene	Chr4:74719297-74719434 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036418	snoRNA gene	Chr4:66252670-66252801 (-)
CAST/EiJ	MGP_CASTEiJ_G0037966	snoRNA gene	Chr4:70029437-70029569 (-)
CBA/J	MGP_CBAJ_G0038804	snoRNA gene	Chr4:77118240-77118377 (-)
DBA/2J	MGP_DBA2J_G0038989	snoRNA gene	Chr4:69427526-69427663 (-)
FVB/NJ	MGP_FVBNJ_G0038944	snoRNA gene	Chr4:68541718-68541855 (-)
LP/J	MGP_LPJ_G0039033	snoRNA gene	Chr4:72531325-72531457 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038945	snoRNA gene	Chr4:81005485-81005622 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039819	snoRNA gene	Chr4:71560041-71560178 (-)
PWK/PhJ	MGP_PWKPhJ_G0037653	snoRNA gene	Chr4:67889588-67889719 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038196	snoRNA gene	Chr4:71635119-71635258 (-)

Homology

• Gene Tree
  Gm25653
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000089098 (Evidence)
• NCBI Gene
  115486284

Representative Sequences			Length	Strain/Species
genomic	115486284	NCBI Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	XR_004942384	RefSeq | MGI Sequence Detail	138	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;