Gm25632 Gene Detail

Summary

• Symbol
  Gm25632
• Name
  predicted gene, 25632

• Feature Type
  snoRNA gene
• IDs
  MGI:5455409
  NCBI Gene: 115489600
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:32115665-32115749 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455409	snoRNA gene	Chr2:32115665-32115749 (+)
129S1/SvImJ	ENSMUSG00200053470	snoRNA gene	Chr2:29087883-29087967 (+)
A/J	ENSMUSG00195050719	snoRNA gene	Chr2:29189202-29189286 (+)
AKR/J	ENSMUSG00220053770	snoRNA gene	Chr2:29307143-29307227 (+)
BALB/cJ	ENSMUSG00180054362	snoRNA gene	Chr2:29203929-29204013 (+)
C3H/HeJ	ENSMUSG00175053858	snoRNA gene	Chr2:29170343-29170427 (+)
C57BL/6NJ	ENSMUSG00215049476	snoRNA gene	Chr2:29235842-29235926 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053379	snoRNA gene	Chr2:28916724-28916808 (+)
CBA/J	ENSMUSG00210017939	snoRNA gene	Chr2:29242879-29242963 (+)
DBA/2J	ENSMUSG00185053926	snoRNA gene	Chr2:29102482-29102566 (+)
FVB/NJ	ENSMUSG00205051019	snoRNA gene	Chr2:28949209-28949293 (+)
JF1/MsJ	ENSUMUG00000056253	snoRNA gene	Chr2:28996364-28996448 (+)
LP/J	ENSMUSG00230047307	snoRNA gene	Chr2:31023433-31023517 (+)
NOD/ShiLtJ	ENSMUSG00190053442	snoRNA gene	Chr2:29203664-29203748 (+)
NZO/HlLtJ	ENSMUSG00225010672	snoRNA gene	Chr2:38780082-38780166 (+)
PWK/PhJ	ENSLUMG00010053094	snoRNA gene	Chr2:29084398-29084482 (+)
SPRET/EiJ	ENSMSPG00010046431	snoRNA gene	Chr2:29791864-29791948 (+)
WSB/EiJ	ENSIUOG00005052760	snoRNA gene	Chr2:29052145-29052229 (+)

Homology

• Gene Tree
  Gm25632
  

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119104 (Evidence)
• NCBI Gene
  115489600

Representative Sequences			Length	Strain/Species
genomic	115489600	NCBI Gene Model | MGI Sequence Detail	85	C57BL/6J
transcript	XR_004941170	RefSeq | MGI Sequence Detail	85	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm25632:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr17253	Chr2:32115048-32115058 (+)	-612 bp