Gm25617 Gene Detail

Summary

• Symbol
  Gm25617
• Name
  predicted gene, 25617

• Feature Type
  snoRNA gene
• IDs
  MGI:5455394
  NCBI Gene: 115486007
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:37978370-37978501 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  35

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455394	snoRNA gene	Chr16:37978370-37978502 (+)
129S1/SvImJ	ENSMUSG00200030002	snoRNA gene	Chr16:34914287-34914419 (+)
129S1/SvImJ	ENSMUSG00200029987	snoRNA gene	Chr16:34914287-34914418 (+)
A/J	ENSMUSG00195011411	snoRNA gene	Chr16:34459229-34459360 (+)
A/J	ENSMUSG00195011426	snoRNA gene	Chr16:34459229-34459361 (+)
AKR/J	ENSMUSG00220029524	snoRNA gene	Chr16:34847270-34847402 (+)
AKR/J	ENSMUSG00220029493	snoRNA gene	Chr16:34847270-34847401 (+)
BALB/cJ	ENSMUSG00180013210	snoRNA gene	Chr16:34674756-34674888 (+)
BALB/cJ	ENSMUSG00180013206	snoRNA gene	Chr16:34674756-34674887 (+)
C3H/HeJ	ENSMUSG00175032566	snoRNA gene	Chr16:34901223-34901355 (+)
C3H/HeJ	ENSMUSG00175032504	snoRNA gene	Chr16:34901223-34901354 (+)
C57BL/6NJ	ENSMUSG00215023413	snoRNA gene	Chr16:34750166-34750298 (+)
C57BL/6NJ	ENSMUSG00215023291	snoRNA gene	Chr16:34750166-34750297 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031903	snoRNA gene	Chr16:35207332-35207464 (+)
CAST/EiJ	ENSTCUG00005031877	snoRNA gene	Chr16:35207332-35207463 (+)
CBA/J	ENSMUSG00210028499	snoRNA gene	Chr16:34958294-34958426 (+)
CBA/J	ENSMUSG00210028481	snoRNA gene	Chr16:34958294-34958425 (+)
DBA/2J	ENSMUSG00185024939	snoRNA gene	Chr16:34861262-34861393 (+)
DBA/2J	ENSMUSG00185024952	snoRNA gene	Chr16:34861262-34861394 (+)
FVB/NJ	ENSMUSG00205027177	snoRNA gene	Chr16:34835395-34835527 (+)
FVB/NJ	ENSMUSG00205027109	snoRNA gene	Chr16:34835395-34835526 (+)
JF1/MsJ	ENSUMUG00000038093	snoRNA gene	Chr16:35104077-35104208 (+)
JF1/MsJ	ENSUMUG00000038152	snoRNA gene	Chr16:35104077-35104209 (+)
LP/J	ENSMUSG00230033030	snoRNA gene	Chr16:37433441-37433573 (+)
LP/J	ENSMUSG00230032997	snoRNA gene	Chr16:37433441-37433572 (+)
NOD/ShiLtJ	ENSMUSG00190023469	snoRNA gene	Chr16:34978244-34978375 (+)
NOD/ShiLtJ	ENSMUSG00190023504	snoRNA gene	Chr16:34978244-34978376 (+)
NZO/HlLtJ	ENSMUSG00225028880	snoRNA gene	Chr16:40532760-40532892 (+)
NZO/HlLtJ	ENSMUSG00225028874	snoRNA gene	Chr16:40532760-40532891 (+)
PWK/PhJ	ENSLUMG00010031067	snoRNA gene	Chr16:35004339-35004470 (+)
PWK/PhJ	ENSLUMG00010031103	snoRNA gene	Chr16:35004339-35004471 (+)
SPRET/EiJ	ENSMSPG00010018579	snoRNA gene	Chr16:34971976-34972108 (+)
SPRET/EiJ	ENSMSPG00010018567	snoRNA gene	Chr16:34971976-34972107 (+)
WSB/EiJ	ENSIUOG00005026985	snoRNA gene	Chr16:35060399-35060530 (+)
WSB/EiJ	ENSIUOG00005027010	snoRNA gene	Chr16:35060399-35060531 (+)

Sequences &
Gene Models

• All Sequences
  41
• RefSeq
  1

• Ensembl
  ENSMUSG00000119029 (Evidence), ENSMUSG00002076470 (Evidence)
• NCBI Gene
  115486007

Representative Sequences			Length	Strain/Species
genomic	115486007	NCBI Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	XR_004939394	RefSeq | MGI Sequence Detail	132	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;