Gm25448 Gene Detail

Summary

• Symbol
  Gm25448
• Name
  predicted gene, 25448

• Feature Type
  snRNA gene
• IDs
  MGI:5455225
  NCBI Gene: 115488245
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62939321-62939427 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455225	snRNA gene	Chr13:62939321-62939427 (+)
129S1/SvImJ	ENSMUSG00200017487	snRNA gene	Chr13:59061104-59061210 (+)
A/J	ENSMUSG00195045837	snRNA gene	Chr13:59215976-59216082 (+)
AKR/J	ENSMUSG00220045261	snRNA gene	Chr13:58289267-58289373 (+)
BALB/cJ	ENSMUSG00180038139	snRNA gene	Chr9:105899636-105899742 (-)
BALB/cJ	ENSMUSG00180038120	snRNA gene	Chr9:105850312-105850418 (-)
BALB/cJ	ENSMUSG00180018227	snRNA gene	Chr13:59534123-59534229 (+)
BALB/cJ	ENSMUSG00180038157	snRNA gene	Chr9:105950339-105950445 (-)
C3H/HeJ	ENSMUSG00175046917	snRNA gene	Chr13:59347192-59347298 (+)
C57BL/6NJ	ENSMUSG00215041529	snRNA gene	Chr13:59349612-59349718 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041557	snRNA gene	Chr13:59741454-59741560 (+)
CBA/J	ENSMUSG00210043516	snRNA gene	Chr13:59546673-59546779 (+)
DBA/2J	ENSMUSG00185009841	snRNA gene	Chr13:60395290-60395396 (+)
FVB/NJ	ENSMUSG00205046914	snRNA gene	Chr13:58521317-58521423 (+)
JF1/MsJ	ENSUMUG00000050247	snRNA gene	ChrX:83354942-83355048 (-)
JF1/MsJ	ENSUMUG00000040703	snRNA gene	Chr13:60025507-60025613 (+)
LP/J	ENSMUSG00230036139	snRNA gene	Chr13:69737632-69737738 (+)
NOD/ShiLtJ	ENSMUSG00190040319	snRNA gene	Chr13:59296177-59296283 (+)
NZO/HlLtJ	ENSMUSG00225013776	snRNA gene	Chr10:6149786-6149892 (+)
NZO/HlLtJ	ENSMUSG00225047594	snRNA gene	Chr13:63446555-63446661 (+)
PWK/PhJ	ENSLUMG00010024550	snRNA gene	Chr13:58859059-58859165 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005025792	snRNA gene	Chr13:58026642-58026748 (+)

Homology

• Gene Tree
  Gm25448
  

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000118956 (Evidence)
• NCBI Gene
  115488245

Representative Sequences			Length	Strain/Species
genomic	115488245	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004938317	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;