Gm25203 Gene Detail

Summary

• Symbol
  Gm25203
• Name
  predicted gene, 25203

• Feature Type
  snoRNA gene
• IDs
  MGI:5454980
  NCBI Gene: 115488090
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:102219732-102219946 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  33

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454980	snoRNA gene	Chr12:102219731-102219946 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038656	snoRNA gene	Chr12:103879401-103879616 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038657	snoRNA gene	Chr12:103879402-103879616 (-)
A/J	MGP_AJ_G0038648	snoRNA gene	Chr12:99885661-99885875 (-)
A/J	MGP_AJ_G0038647	snoRNA gene	Chr12:99885660-99885875 (-)
AKR/J	MGP_AKRJ_G0038583	snoRNA gene	Chr12:102729229-102729444 (-)
AKR/J	MGP_AKRJ_G0038584	snoRNA gene	Chr12:102729230-102729444 (-)
BALB/cJ	MGP_BALBcJ_G0038634	snoRNA gene	Chr12:100227428-100227642 (-)
BALB/cJ	MGP_BALBcJ_G0038633	snoRNA gene	Chr12:100227427-100227642 (-)
C3H/HeJ	MGP_C3HHeJ_G0038295	snoRNA gene	Chr12:103184994-103185209 (-)
C3H/HeJ	MGP_C3HHeJ_G0038296	snoRNA gene	Chr12:103184995-103185209 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039179	snoRNA gene	Chr12:107128223-107128437 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039178	snoRNA gene	Chr12:107128222-107128437 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036278	snoRNA gene	Chr2:113855877-113856091 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036277	snoRNA gene	Chr2:113855877-113856090 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0038268	snoRNA gene	Chr12:111091262-111091476 (-)
CBA/J	MGP_CBAJ_G0038267	snoRNA gene	Chr12:111091261-111091476 (-)
DBA/2J	MGP_DBA2J_G0038457	snoRNA gene	Chr12:99411050-99411264 (-)
DBA/2J	MGP_DBA2J_G0038456	snoRNA gene	Chr12:99411049-99411264 (-)
FVB/NJ	MGP_FVBNJ_G0038409	snoRNA gene	Chr12:98137361-98137576 (-)
FVB/NJ	MGP_FVBNJ_G0038410	snoRNA gene	Chr12:98137362-98137576 (-)
LP/J	MGP_LPJ_G0038496	snoRNA gene	Chr12:103733350-103733564 (-)
LP/J	MGP_LPJ_G0038495	snoRNA gene	Chr12:103733349-103733564 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038407	snoRNA gene	Chr12:114568090-114568305 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038408	snoRNA gene	Chr12:114568091-114568305 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039281	snoRNA gene	Chr12:102236171-102236385 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039280	snoRNA gene	Chr12:102236170-102236385 (-)
PWK/PhJ	MGP_PWKPhJ_G0037123	snoRNA gene	Chr12:93965102-93965316 (-)
PWK/PhJ	MGP_PWKPhJ_G0037122	snoRNA gene	Chr12:93965101-93965316 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036880	snoRNA gene	Chr12:96411372-96411587 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036881	snoRNA gene	Chr12:96411373-96411587 (-)
WSB/EiJ	MGP_WSBEiJ_G0037669	snoRNA gene	Chr12:103122157-103122372 (-)
WSB/EiJ	MGP_WSBEiJ_G0037670	snoRNA gene	Chr12:103122158-103122372 (-)

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39
• RefSeq
  1

• Ensembl
  ENSMUSG00000064776 (Evidence), ENSMUSG00000105037 (Evidence)
• NCBI Gene
  115488090

Representative Sequences			Length	Strain/Species
genomic	115488090	NCBI Gene Model | MGI Sequence Detail	215	C57BL/6J
transcript	XR_004937898	RefSeq | MGI Sequence Detail	215	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm25203:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117394	Chr12:102219944-102219946 (-)	1 bp