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Mir5624 Gene Detail
Summary
  • Symbol
    Mir5624
  • Name
    microRNA 5624
  • Synonyms
    mmu-mir-5624
Location &
Maps
more
  • Sequence Map
    Chr13:93927285-93927345 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5454852
 miRNA gene Chr13:93927285-93927345 (+)
129S1/SvImJ MGP_129S1SvImJ_G0008090
 miRNA gene Chr13:95165111-95165171 (+)
A/J MGP_AJ_G0008079
 miRNA gene Chr13:91617177-91617237 (+)
AKR/J MGP_AKRJ_G0008058
 miRNA gene Chr13:94416823-94416883 (+)
BALB/cJ MGP_BALBcJ_G0008060
 miRNA gene Chr13:92264541-92264601 (+)
C3H/HeJ MGP_C3HHeJ_G0008005
 miRNA gene Chr13:94118695-94118755 (+)
C57BL/6NJ MGP_C57BL6NJ_G0008247
 miRNA gene Chr13:98065642-98065702 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007346
 miRNA gene Chr13:87474309-87474371 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0007972
 miRNA gene Chr13:101966895-101966955 (+)
DBA/2J MGP_DBA2J_G0008007
 miRNA gene Chr13:91408367-91408427 (+)
FVB/NJ MGP_FVBNJ_G0008031
 miRNA gene Chr13:90199309-90199369 (+)
LP/J MGP_LPJ_G0008090
 miRNA gene Chr13:95287481-95287541 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007999
 miRNA gene Chr13:102454311-102454371 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0008246
 miRNA gene Chr13:93789242-93789302 (+)
PWK/PhJ MGP_PWKPhJ_G0007806
 miRNA gene Chr13:90123380-90123440 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007702
 miRNA gene Chr13:90075818-90075878 (+)
WSB/EiJ MGP_WSBEiJ_G0007959
 miRNA gene Chr13:94301255-94301315 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100885837 NCBI Gene Model | MGI Sequence Detail 61 C57BL/6J ±  kb
transcript NR_049198 RefSeq | MGI Sequence Detail 61 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0019193
References
more
  • Summaries
    All 7
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory