Gm24940 MGI Mouse Gene Detail - MGI:5454717

Sequence Map

Chr1:163229852-163229959 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454717	snRNA gene	Chr1:163229852-163229971 (+)
129S1/SvImJ	ENSMUSG00200006753	snRNA gene	Chr1:160700188-160700295 (+)
A/J	ENSMUSG00195024651	snRNA gene	Chr1:160040356-160040463 (+)
AKR/J	ENSMUSG00220014376	snRNA gene	Chr1:159840506-159840613 (+)
BALB/cJ	ENSMUSG00180041487	snRNA gene	Chr1:160281610-160281717 (+)
C3H/HeJ	ENSMUSG00175043852	snRNA gene	Chr1:160366893-160367000 (+)
C57BL/6NJ	ENSMUSG00215041519	snRNA gene	Chr1:160250163-160250270 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034719	snRNA gene	Chr1:153930078-153930191 (+)
CAST/EiJ	ENSTCUG00005021069	snRNA gene	Chr1:158857804-158857911 (+)
CBA/J	ENSMUSG00210021545	snRNA gene	Chr1:160245866-160245973 (+)
DBA/2J	ENSMUSG00185011838	snRNA gene	Chr1:164501497-164501604 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000012189	snRNA gene	Chr1:163651396-163651503 (+)
LP/J	ENSMUSG00230026665	snRNA gene	Chr1:164110608-164110715 (+)
NOD/ShiLtJ	ENSMUSG00190044736	snRNA gene	Chr1:160085987-160086094 (+)
NZO/HlLtJ	ENSMUSG00225004846	snRNA gene	Chr1:167703978-167704085 (+)
PWK/PhJ	ENSLUMG00010046884	snRNA gene	Chr1:159046412-159046519 (+)
SPRET/EiJ	ENSMSPG00010043137	snRNA gene	Chr1:162506088-162506194 (+)
WSB/EiJ	ENSIUOG00005015894	snRNA gene	Chr1:159594446-159594553 (+)

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Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000088951	Ensembl Gene Model \| MGI Sequence Detail	108	C57BL/6J	± kb
	transcript	ENSMUST00000158326	Ensembl \| MGI Sequence Detail	108	Not Applicable

Summaries

All 5

Gene Ontology 1
Earliest

J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
Latest

J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24