Gm24846 Gene Detail

Summary

• Symbol
  Gm24846
• Name
  predicted gene, 24846

• Feature Type
  snRNA gene
• IDs
  MGI:5454623
  NCBI Gene: 115486587
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:103913890-103913997 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454623	snRNA gene	Chr7:103913890-103913997 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038344	snRNA gene	ChrX:118801024-118801131 (+)
A/J	MGP_AJ_G0038136	snRNA gene	Chr7:104675151-104675258 (-)
AKR/J	MGP_AKRJ_G0038276	snRNA gene	ChrX:122256474-122256581 (+)
BALB/cJ	MGP_BALBcJ_G0038121	snRNA gene	Chr7:104407167-104407274 (-)
C3H/HeJ	MGP_C3HHeJ_G0037790	snRNA gene	Chr7:107554629-107554736 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038860	snRNA gene	ChrX:122393510-122393617 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036940	snRNA gene	Chr7:99274634-99274741 (-)
CBA/J	MGP_CBAJ_G0037764	snRNA gene	Chr7:115466877-115466984 (-)
DBA/2J	MGP_DBA2J_G0038150	snRNA gene	ChrX:117763210-117763317 (+)
FVB/NJ	MGP_FVBNJ_G0038097	snRNA gene	ChrX:117063740-117063847 (+)
LP/J	MGP_LPJ_G0038189	snRNA gene	ChrX:119735333-119735440 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037901	snRNA gene	Chr7:116942576-116942683 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038965	snRNA gene	ChrX:118326451-118326558 (+)
PWK/PhJ	MGP_PWKPhJ_G0036629	snRNA gene	Chr7:96007525-96007632 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036397	snRNA gene	Chr7:93627736-93627843 (-)
WSB/EiJ	MGP_WSBEiJ_G0037361	snRNA gene	ChrX:116892100-116892207 (+)

Homology

• Gene Tree
  Gm24846
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000088658 (Evidence)
• NCBI Gene
  115486587

Representative Sequences			Length	Strain/Species
genomic	115486587	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004934461	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;