Gm24574 Gene Detail

Summary

• Symbol
  Gm24574
• Name
  predicted gene, 24574

• Feature Type
  miRNA gene
• IDs
  MGI:5454351
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr2:75489588-75489661 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454351	miRNA gene	Chr2:75489588-75489661 (+)
129S1/SvImJ	ENSMUSG00200004971	miRNA gene	Chr2:72531020-72531093 (+)
A/J	ENSMUSG00195020517	miRNA gene	Chr2:72677841-72677914 (+)
AKR/J	ENSMUSG00220002485	miRNA gene	Chr2:72647437-72647510 (+)
BALB/cJ	ENSMUSG00180007438	miRNA gene	Chr2:72631518-72631591 (+)
C3H/HeJ	ENSMUSG00175011274	miRNA gene	Chr2:72754810-72754883 (+)
C57BL/6NJ	ENSMUSG00215029430	miRNA gene	Chr2:72601853-72601926 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007725	miRNA gene	Chr2:70462947-70463020 (+)
CAST/EiJ	ENSTCUG00005032248	miRNA gene	Chr2:72075283-72075356 (+)
CBA/J	ENSMUSG00210002627	miRNA gene	Chr2:72795864-72795937 (+)
DBA/2J	ENSMUSG00185011484	miRNA gene	Chr2:72631693-72631766 (+)
FVB/NJ	ENSMUSG00205018729	miRNA gene	Chr2:72092775-72092848 (+)
JF1/MsJ	ENSUMUG00000043433	miRNA gene	Chr2:72334552-72334625 (+)
LP/J	ENSMUSG00230026930	miRNA gene	Chr2:74436123-74436196 (+)
NOD/ShiLtJ	ENSMUSG00190010985	miRNA gene	Chr2:72706995-72707068 (+)
NZO/HlLtJ	ENSMUSG00225003706	miRNA gene	Chr2:82200885-82200958 (+)
PWK/PhJ	ENSLUMG00010032707	miRNA gene	Chr2:72562976-72563049 (+)
SPRET/EiJ	ENSMSPG00010021695	miRNA gene	Chr2:73947203-73947276 (+)
WSB/EiJ	ENSIUOG00005011561	miRNA gene	Chr2:72759181-72759254 (+)

Homology

• Gene Tree
  Gm24574
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm24574
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000093242 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093242	Ensembl Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	ENSMUST00000175501	Ensembl | MGI Sequence Detail	74	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087

TSS for Gm24574:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr18457	Chr2:75489400-75489435 (+)	-170 bp
Tssr18458	Chr2:75489436-75489452 (+)	-144 bp