Gm24540 Gene Detail

Summary

• Symbol
  Gm24540
• Name
  predicted gene, 24540

• Feature Type
  snRNA gene
• IDs
  MGI:5454317
  NCBI Gene: 115488444
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:74005302-74005408 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  43 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454317	snRNA gene	Chr14:74005302-74005408 (-)
129S1/SvImJ	ENSMUSG00200011196	snRNA gene	Chr14:62447434-62447540 (-)
A/J	ENSMUSG00195004267	snRNA gene	Chr14:62575320-62575426 (-)
AKR/J	ENSMUSG00220007546	snRNA gene	Chr14:61898434-61898540 (-)
BALB/cJ	ENSMUSG00180023868	snRNA gene	Chr14:62181805-62181911 (-)
C3H/HeJ	ENSMUSG00175031884	snRNA gene	Chr14:63922973-63923079 (-)
C57BL/6NJ	ENSMUSG00215026386	snRNA gene	Chr14:62157205-62157311 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032984	snRNA gene	Chr14:63817780-63817885 (-)
CBA/J	ENSMUSG00210010392	snRNA gene	Chr14:62561649-62561755 (-)
DBA/2J	ENSMUSG00185024246	snRNA gene	Chr14:67708371-67708477 (-)
FVB/NJ	ENSMUSG00205026159	snRNA gene	Chr14:61998364-61998470 (-)
FVB/NJ	ENSMUSG00205001010	snRNA gene	Chr3:35480567-35480673 (+)
JF1/MsJ	ENSUMUG00000046189	snRNA gene	Chr14:78911799-78911904 (-)
LP/J	ENSMUSG00230017575	snRNA gene	Chr14:79797589-79797695 (-)
NOD/ShiLtJ	ENSMUSG00190011466	snRNA gene	Chr14:62325941-62326047 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010011447	snRNA gene	Chr14:61779638-61779743 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005023927	snRNA gene	Chr14:61771324-61771430 (-)

Homology

• Gene Tree
  Gm24540
  

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000119684 (Evidence)
• NCBI Gene
  115488444

Representative Sequences			Length	Strain/Species
genomic	115488444	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004938754	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;