Gm24539 Gene Detail

Summary

• Symbol
  Gm24539
• Name
  predicted gene, 24539

• Feature Type
  snoRNA gene
• IDs
  MGI:5454316
  NCBI Gene: 115488211
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62284744-62284876 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454316	snoRNA gene	Chr13:62284744-62284876 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195046198	snoRNA gene	Chr13:58546451-58546583 (+)
AKR/J	ENSMUSG00220044738	snoRNA gene	Chr13:58040874-58041006 (-)
BALB/cJ	ENSMUSG00180018517	snoRNA gene	Chr13:58902469-58902601 (+)
C3H/HeJ	ENSMUSG00175041988	snoRNA gene	Chr13:58692510-58692642 (+)
C57BL/6NJ	ENSMUSG00215039618	snoRNA gene	Chr13:58694925-58695057 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040775	snoRNA gene	Chr13:58998810-58998942 (+)
CBA/J	ENSMUSG00210039722	snoRNA gene	Chr13:58892031-58892163 (+)
DBA/2J	ENSMUSG00185017483	snoRNA gene	Chr13:59740651-59740783 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000039871	snoRNA gene	Chr13:59297132-59297264 (+)
LP/J	ENSMUSG00230036051	snoRNA gene	Chr13:69094920-69095052 (+)
NOD/ShiLtJ	ENSMUSG00190036159	snoRNA gene	Chr13:58660507-58660639 (+)
NZO/HlLtJ	ENSMUSG00225047581	snoRNA gene	Chr13:62791911-62792043 (+)
PWK/PhJ	ENSLUMG00010024289	snoRNA gene	Chr13:58116261-58116393 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005024144	snoRNA gene	Chr13:60707725-60707857 (+)

Homology

• Gene Tree
  Gm24539
  

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000119163 (Evidence)
• NCBI Gene
  115488211

Representative Sequences			Length	Strain/Species
genomic	115488211	NCBI Gene Model | MGI Sequence Detail	133	C57BL/6J
transcript	XR_004938269	RefSeq | MGI Sequence Detail	133	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;