Gm24242 Gene Detail

Summary

• Symbol
  Gm24242
• Name
  predicted gene, 24242

• Feature Type
  snRNA gene
• IDs
  MGI:5454019
  NCBI Gene: 115490325
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:151623667-151623773 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454019	snRNA gene	Chr5:151623667-151623773 (-)
129S1/SvImJ	ENSMUSG00200010869	snRNA gene	Chr5:145424612-145424718 (-)
A/J	ENSMUSG00195005201	snRNA gene	Chr5:145082206-145082312 (-)
AKR/J	ENSMUSG00220018252	snRNA gene	Chr18:72387005-72387109 (-)
AKR/J	ENSMUSG00220000964	snRNA gene	Chr3:34881659-34881765 (+)
AKR/J	ENSMUSG00220015623	snRNA gene	Chr5:144074429-144074535 (-)
BALB/cJ	ENSMUSG00180003268	snRNA gene	Chr5:145484436-145484542 (-)
C3H/HeJ	ENSMUSG00175012072	snRNA gene	Chr5:147357627-147357733 (-)
C57BL/6NJ	ENSMUSG00215000084	snRNA gene	Chr5:145015289-145015395 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009985	snRNA gene	Chr5:144591778-144591884 (-)
CBA/J	ENSMUSG00210001130	snRNA gene	Chr3:45051990-45052096 (+)
CBA/J	ENSMUSG00210001039	snRNA gene	Chr5:146205456-146205562 (-)
CBA/J	ENSMUSG00210017381	snRNA gene	Chr13:114834003-114834109 (+)
DBA/2J	ENSMUSG00185042168	snRNA gene	Chr5:149181811-149181917 (-)
FVB/NJ	ENSMUSG00205005860	snRNA gene	Chr12:58699560-58699666 (-)
FVB/NJ	ENSMUSG00205000154	snRNA gene	Chr5:144842185-144842291 (-)
JF1/MsJ	ENSUMUG00000026799	snRNA gene	Chr1:17945842-17945948 (+)
JF1/MsJ	ENSUMUG00000052098	snRNA gene	Chr5:151647053-151647159 (-)
LP/J	ENSMUSG00230001404	snRNA gene	Chr5:153141108-153141214 (-)
NOD/ShiLtJ	ENSMUSG00190006003	snRNA gene	Chr5:144816452-144816558 (-)
NZO/HlLtJ	ENSMUSG00225009190	snRNA gene	Chr5:160927535-160927641 (-)
PWK/PhJ	ENSLUMG00010000470	snRNA gene	Chr5:143901934-143902040 (-)
SPRET/EiJ	ENSMSPG00010006489	snRNA gene	Chr5:146704338-146704461 (-)
WSB/EiJ	ENSIUOG00005014299	snRNA gene	Chr5:147678623-147678729 (-)

Homology

• Gene Tree
  Gm24242
  

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000118838 (Evidence)
• NCBI Gene
  115490325

Representative Sequences			Length	Strain/Species
genomic	115490325	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004942877	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;