Gm24195 Gene Detail

Summary

• Symbol
  Gm24195
• Name
  predicted gene, 24195

• Feature Type
  miRNA gene
• IDs
  MGI:5453972
  NCBI Gene: 114483555
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:54725952-54726034 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453972	miRNA gene	Chr13:54725926-54726062 (+)
129S1/SvImJ	ENSMUSG00200017489	miRNA gene	Chr13:51598347-51598483 (+)
A/J	ENSMUSG00195046964	miRNA gene	Chr13:51065100-51065236 (+)
AKR/J	ENSMUSG00220043172	miRNA gene	Chr13:50609889-50610025 (+)
BALB/cJ	ENSMUSG00180017752	miRNA gene	Chr13:51316363-51316499 (+)
C3H/HeJ	ENSMUSG00175041243	miRNA gene	Chr13:51102866-51103002 (+)
C57BL/6NJ	ENSMUSG00215040720	miRNA gene	Chr13:51127380-51127516 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007331	miRNA gene	Chr13:49998079-49998224 (+)
CAST/EiJ	ENSTCUG00005040136	miRNA gene	Chr13:51527193-51527329 (+)
CBA/J	ENSMUSG00210042205	miRNA gene	Chr13:51307671-51307807 (+)
DBA/2J	ENSMUSG00185017348	miRNA gene	Chr13:52149656-52149792 (+)
FVB/NJ	ENSMUSG00205045467	miRNA gene	Chr13:50956485-50956621 (+)
JF1/MsJ	ENSUMUG00000039840	miRNA gene	Chr13:51552088-51552229 (+)
LP/J	ENSMUSG00230035354	miRNA gene	Chr13:61494200-61494336 (+)
NOD/ShiLtJ	ENSMUSG00190038259	miRNA gene	Chr13:51196851-51196987 (+)
NZO/HlLtJ	ENSMUSG00225035273	miRNA gene	Chr13:55221459-55221595 (+)
PWK/PhJ	ENSLUMG00010024111	miRNA gene	Chr13:50413960-50414096 (+)
SPRET/EiJ	ENSMSPG00010040949	miRNA gene	Chr13:50839134-50839270 (+)
WSB/EiJ	ENSIUOG00005025626	miRNA gene	Chr13:50623763-50623899 (+)

Homology

• Gene Tree
  Gm24195
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24195
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000080454 (Evidence)
• NCBI Gene
  114483555

Representative Sequences			Length	Strain/Species
genomic	114483555	NCBI Gene Model | MGI Sequence Detail	83	C57BL/6J
transcript	NR_162773	RefSeq | MGI Sequence Detail	83	ZRU/MplStud

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 1
• Earliest
  J:190741 Migdalska AM, et al., Generation of the Sotos syndrome deletion in mice. Mamm Genome. 2012 Dec;23(11-12):749-57
• Latest
  J:381892 Fromm B, et al., A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome. Annu Rev Genet. 2015;49:213-42

TSS for Gm24195:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119876	Chr13:54725715-54725731 (+)	-229 bp