Gm23779 Gene Detail

Summary

• Symbol
  Gm23779
• Name
  predicted gene, 23779

• Feature Type
  snRNA gene
• IDs
  MGI:5453556
  NCBI Gene: 115488273
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:21670508-21670571 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453556	snRNA gene	Chr13:21670508-21670571 (-)
129S1/SvImJ	ENSMUSG00200014563	snRNA gene	Chr13:18869434-18869497 (-)
A/J	ENSMUSG00195041569	snRNA gene	Chr13:18013485-18013548 (-)
AKR/J	ENSMUSG00220032330	snRNA gene	Chr13:17928841-17928904 (-)
BALB/cJ	ENSMUSG00180036066	snRNA gene	Chr13:18374772-18374835 (-)
C3H/HeJ	ENSMUSG00175035291	snRNA gene	Chr13:18479907-18479970 (-)
C57BL/6NJ	ENSMUSG00215037525	snRNA gene	Chr13:18426481-18426544 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014841	snRNA gene	Chr13:18502002-18502065 (-)
CBA/J	ENSMUSG00210031992	snRNA gene	Chr13:18341464-18341527 (-)
DBA/2J	ENSMUSG00185014837	snRNA gene	Chr13:19035832-19035895 (-)
FVB/NJ	ENSMUSG00205051727	snRNA gene	Chr13:18185289-18185352 (-)
JF1/MsJ	ENSUMUG00000022301	snRNA gene	Chr13:18752625-18752688 (-)
LP/J	ENSMUSG00230035536	snRNA gene	Chr13:28429875-28429938 (-)
NOD/ShiLtJ	ENSMUSG00190022608	snRNA gene	Chr13:18294645-18294708 (-)
NZO/HlLtJ	ENSMUSG00225045965	snRNA gene	Chr13:22190649-22190712 (-)
PWK/PhJ	ENSLUMG00010033651	snRNA gene	Chr13:17746204-17746267 (-)
SPRET/EiJ	ENSMSPG00010019793	snRNA gene	Chr13:17464777-17464840 (-)
WSB/EiJ	ENSIUOG00005037731	snRNA gene	Chr13:17670612-17670675 (-)

Homology

• Gene Tree
  Gm23779
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm23779
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088563 (Evidence)
• NCBI Gene
  115488273

Representative Sequences			Length	Strain/Species
genomic	115488273	NCBI Gene Model | MGI Sequence Detail	64	C57BL/6J
transcript	XR_004938341	RefSeq | MGI Sequence Detail	64	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:71411 Arkell RM, et al., Genetic, physical, and phenotypic characterization of the Del(13)Svea36H mouse. Mamm Genome. 2001 Sep;12(9):687-94
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44