Gm23731 Gene Detail

Summary

• Symbol
  Gm23731
• Name
  predicted gene, 23731

• Feature Type
  snRNA gene
• IDs
  MGI:5453508
  NCBI Gene: 115489663
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:102728305-102728411 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  31

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453508	snRNA gene	Chr2:102728305-102728411 (+)
129S1/SvImJ	ENSMUSG00200002474	snRNA gene	Chr2:99538798-99538904 (+)
A/J	ENSMUSG00195000663	snRNA gene	Chr2:99718675-99718781 (+)
AKR/J	ENSMUSG00220001658	snRNA gene	Chr2:99463507-99463613 (+)
BALB/cJ	ENSMUSG00180021703	snRNA gene	Chr2:99513952-99514058 (+)
C3H/HeJ	ENSMUSG00175010213	snRNA gene	Chr2:99788156-99788262 (+)
C57BL/6NJ	ENSMUSG00215017982	snRNA gene	Chr2:99610398-99610504 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005367	snRNA gene	Chr6:44533574-44533680 (-)
CAST/EiJ	ENSTCUG00005044871	snRNA gene	Chr12:106019080-106019186 (-)
CAST/EiJ	ENSTCUG00005007381	snRNA gene	Chr15:51391014-51391120 (-)
CAST/EiJ	ENSTCUG00005016148	snRNA gene	Chr18:62395218-62395324 (-)
CAST/EiJ	ENSTCUG00005001656	snRNA gene	Chr2:98874436-98874542 (+)
CAST/EiJ	ENSTCUG00005005085	snRNA gene	Chr4:33113648-33113754 (+)
CBA/J	ENSMUSG00210002336	snRNA gene	Chr2:99791838-99791944 (+)
DBA/2J	ENSMUSG00185005596	snRNA gene	Chr2:99510876-99510982 (+)
FVB/NJ	ENSMUSG00205011206	snRNA gene	Chr2:98829456-98829562 (+)
JF1/MsJ	ENSUMUG00000030424	snRNA gene	Chr2:99205284-99205390 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190023787	snRNA gene	Chr2:99614241-99614347 (+)
NZO/HlLtJ	ENSMUSG00225008966	snRNA gene	Chr2:109161506-109161612 (+)
PWK/PhJ	ENSLUMG00010047248	snRNA gene	Chr1:159461171-159461277 (+)
PWK/PhJ	ENSLUMG00010021905	snRNA gene	Chr10:8741261-8741367 (+)
PWK/PhJ	ENSLUMG00010025203	snRNA gene	Chr2:99202189-99202295 (+)
SPRET/EiJ	ENSMSPG00010015596	snRNA gene	Chr8:52518630-52518736 (-)
SPRET/EiJ	ENSMSPG00010012831	snRNA gene	Chr14:111038024-111038130 (+)
SPRET/EiJ	ENSMSPG00010009273	snRNA gene	Chr11:1336446-1336552 (-)
SPRET/EiJ	ENSMSPG00010015810	snRNA gene	Chr16:75110753-75110859 (-)
SPRET/EiJ	ENSMSPG00010012171	snRNA gene	Chr2:57747376-57747482 (-)
SPRET/EiJ	ENSMSPG00010008947	snRNA gene	Chr2:101238200-101238306 (+)
SPRET/EiJ	ENSMSPG00010027259	snRNA gene	Chr9:20279065-20279171 (+)
SPRET/EiJ	ENSMSPG00010010422	snRNA gene	Chr7:106931280-106931386 (-)
WSB/EiJ	ENSIUOG00005001565	snRNA gene	Chr2:99312310-99312416 (+)

Homology

• Gene Tree
  Gm23731
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm23731
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  5
• GO References
  1

Sequences &
Gene Models

• All Sequences
  35
• RefSeq
  1

• Ensembl
  ENSMUSG00000119260 (Evidence)
• NCBI Gene
  115489663

Representative Sequences			Length	Strain/Species
genomic	115489663	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004941252	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 7

  Gene Ontology 1

  Phenotypes 3
• Earliest
  J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087