Gm23610 Gene Detail

Summary

• Symbol
  Gm23610
• Name
  predicted gene, 23610

• Feature Type
  snRNA gene
• IDs
  MGI:5453387
  NCBI Gene: 115488968
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:47033868-47033974 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453387	snRNA gene	Chr18:47033868-47033974 (+)
129S1/SvImJ	ENSMUSG00200031278	snRNA gene	Chr18:44051656-44051762 (+)
A/J	ENSMUSG00195025493	snRNA gene	Chr18:44230163-44230269 (+)
AKR/J	ENSMUSG00220021821	snRNA gene	Chr18:44180030-44180136 (+)
BALB/cJ	ENSMUSG00180048806	snRNA gene	Chr4:133721685-133721792 (+)
BALB/cJ	ENSMUSG00180008082	snRNA gene	Chr18:44722835-44722942 (+)
C3H/HeJ	ENSMUSG00175011223	snRNA gene	Chr18:44240783-44240890 (+)
C3H/HeJ	ENSMUSG00175044233	snRNA gene	Chr4:134748260-134748367 (+)
C57BL/6NJ	ENSMUSG00215009030	snRNA gene	Chr18:43919213-43919319 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014154	snRNA gene	Chr18:43655570-43655676 (+)
CBA/J	ENSMUSG00210030989	snRNA gene	Chr4:134372202-134372309 (+)
CBA/J	ENSMUSG00210022497	snRNA gene	Chr18:44292567-44292674 (+)
DBA/2J	ENSMUSG00185028570	snRNA gene	Chr18:44192750-44192857 (+)
FVB/NJ	ENSMUSG00205015933	snRNA gene	Chr18:43664062-43664168 (+)
JF1/MsJ	ENSUMUG00000029684	snRNA gene	Chr18:44205564-44205670 (+)
LP/J	ENSMUSG00230029716	snRNA gene	Chr18:46263098-46263204 (+)
NOD/ShiLtJ	ENSMUSG00190029311	snRNA gene	Chr18:43964763-43964869 (+)
NZO/HlLtJ	ENSMUSG00225027789	snRNA gene	Chr18:46144203-46144309 (+)
NZO/HlLtJ	ENSMUSG00225048430	snRNA gene	ChrX:86271190-86271296 (+)
NZO/HlLtJ	ENSMUSG00225037773	snRNA gene	Chr13:105016867-105016969 (+)
PWK/PhJ	ENSLUMG00010052802	snRNA gene	Chr10:75261860-75261966 (-)
PWK/PhJ	ENSLUMG00010022152	snRNA gene	Chr18:44317216-44317322 (+)
SPRET/EiJ	ENSMSPG00010013324	snRNA gene	Chr18:44479429-44479535 (+)
WSB/EiJ	ENSIUOG00005009766	snRNA gene	Chr18:43898492-43898595 (+)

Homology

• Gene Tree
  Gm23610
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm23610
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  5
• GO References
  1

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000119886 (Evidence)
• NCBI Gene
  115488968

Representative Sequences			Length	Strain/Species
genomic	115488968	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004940078	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 5

  Gene Ontology 1

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67