Gm23552 Gene Detail

Summary

• Symbol
  Gm23552
• Name
  predicted gene, 23552

• Feature Type
  snRNA gene
• IDs
  MGI:5453329
  NCBI Gene: 115489354
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:130153716-130153789 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  17 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453329	snRNA gene	Chr6:130153715-130153818 (+)
129S1/SvImJ	ENSMUSG00200047957	snRNA gene	Chr6:127413221-127413294 (+)
129S1/SvImJ	ENSMUSG00200047973	snRNA gene	Chr6:127578855-127578928 (+)
A/J	ENSMUSG00195032963	snRNA gene	Chr6:126563470-126563543 (+)
AKR/J	ENSMUSG00220040861	snRNA gene	Chr6:125425025-125425098 (+)
BALB/cJ	ENSMUSG00180041749	snRNA gene	Chr6:126900322-126900395 (+)
C3H/HeJ	ENSMUSG00175042806	snRNA gene	Chr6:126580511-126580584 (+)
C57BL/6NJ	ENSMUSG00215030974	snRNA gene	Chr6:126984039-126984112 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041419	snRNA gene	Chr6:126900389-126900462 (+)
CBA/J	ENSMUSG00210016694	snRNA gene	Chr6:126600294-126600367 (+)
DBA/2J	ENSMUSG00185043760	snRNA gene	Chr6:127298759-127298832 (+)
FVB/NJ	ENSMUSG00205041617	snRNA gene	Chr6:126592512-126592585 (+)
FVB/NJ	ENSMUSG00205041581	snRNA gene	Chr6:126426817-126426890 (+)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010042059	snRNA gene	Chr6:125079641-125079714 (+)
SPRET/EiJ	ENSMSPG00010044266	snRNA gene	Chr6:127915351-127915424 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm23552
  

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000119829 (Evidence)
• NCBI Gene
  115489354

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119829	Ensembl Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	ENSMUST00000240052	Ensembl | MGI Sequence Detail	74	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;