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Gm23540 Gene Detail
Summary
  • Symbol
    Gm23540
  • Name
    predicted gene, 23540
Location &
Maps
more
  • Sequence Map
    Chr4:120941183-120941346 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5453317
 snRNA gene Chr4:120941183-120941346 (-)
129S1/SvImJ ENSMUSG00200014628
 snRNA gene Chr4:114841140-114841303 (-)
A/J ENSMUSG00195033084
 snRNA gene Chr4:116072987-116073150 (-)
AKR/J ENSMUSG00220022849
 snRNA gene Chr4:115462185-115462348 (-)
BALB/cJ ENSMUSG00180047991
 snRNA gene Chr4:114128995-114129158 (-)
C3H/HeJ ENSMUSG00175025570
 snRNA gene Chr4:115142119-115142282 (-)
C57BL/6NJ ENSMUSG00215039097
 snRNA gene Chr4:116281134-116281297 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0035314
 snRNA gene Chr4:111599518-111599682 (-)
CAST/EiJ ENSTCUG00005045952
 snRNA gene Chr4:114955690-114955853 (-)
CBA/J ENSMUSG00210052761
 snRNA gene Chr4:114748564-114748727 (-)
DBA/2J ENSMUSG00185048209
 snRNA gene Chr4:116303594-116303757 (-)
FVB/NJ ENSMUSG00205025579
 snRNA gene Chr4:114230512-114230675 (-)
JF1/MsJ ENSUMUG00000023517
 snRNA gene Chr4:116220820-116220983 (-)
LP/J ENSMUSG00230046323
 snRNA gene Chr4:119659403-119659566 (-)
NOD/ShiLtJ ENSMUSG00190046943
 snRNA gene Chr4:114141950-114142113 (-)
NZO/HlLtJ ENSMUSG00225016795
 snRNA gene Chr4:125211988-125212151 (-)
PWK/PhJ ENSLUMG00010047567
 snRNA gene Chr4:113626607-113626770 (-)
SPRET/EiJ ENSMSPG00010040678
 snRNA gene Chr4:115714990-115715152 (-)
WSB/EiJ ENSIUOG00005046986
 snRNA gene Chr4:114457303-114457466 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115490045 NCBI Gene Model | MGI Sequence Detail 164 C57BL/6J ±  kb
transcript XR_004942329 RefSeq | MGI Sequence Detail 164 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 8
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory