Gm23511 Gene Detail

Summary

• Symbol
  Gm23511
• Name
  predicted gene, 23511

• Feature Type
  snRNA gene
• IDs
  MGI:5453288
  NCBI Gene: 115489832
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:48909171-48909334 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  229 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453288	snRNA gene	Chr3:48909171-48909334 (+)
129S1/SvImJ	ENSMUSG00200000394	snRNA gene	Chr3:45727406-45727569 (+)
A/J	ENSMUSG00195000762	snRNA gene	Chr3:45726654-45726818 (+)
AKR/J	ENSMUSG00220015936	snRNA gene	Chr3:45758841-45759005 (+)
BALB/cJ	ENSMUSG00180000396	snRNA gene	Chr3:45804093-45804257 (+)
C3H/HeJ	ENSMUSG00175002193	snRNA gene	Chr3:45644694-45644858 (+)
C57BL/6NJ	ENSMUSG00215000625	snRNA gene	Chr3:46037080-46037243 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009732	snRNA gene	Chr3:45481221-45481384 (+)
CBA/J	ENSMUSG00210000810	snRNA gene	Chr3:45757791-45757955 (+)
DBA/2J	ENSMUSG00185000393	snRNA gene	Chr3:45976564-45976728 (+)
FVB/NJ	ENSMUSG00205010095	snRNA gene	Chr3:44962833-44962997 (+)
JF1/MsJ	ENSUMUG00000029461	snRNA gene	Chr3:45379150-45379313 (+)
LP/J	ENSMUSG00230000399	snRNA gene	Chr3:47905961-47906124 (+)
NOD/ShiLtJ	ENSMUSG00190000275	snRNA gene	Chr3:46104695-46104859 (+)
NZO/HlLtJ	ENSMUSG00225000620	snRNA gene	Chr3:50530941-50531104 (+)
PWK/PhJ	ENSLUMG00010010074	snRNA gene	Chr3:45537163-45537306 (+)
SPRET/EiJ	ENSMSPG00010007558	snRNA gene	Chr3:46167401-46167565 (+)
WSB/EiJ	ENSIUOG00005000451	snRNA gene	Chr3:45907342-45907506 (+)

Homology

• Gene Tree
  Gm23511
  

Gene Ontology
(GO)
Classifications

• All GO Annotations
  3
• GO References
  1

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118871 (Evidence)
• NCBI Gene
  115489832

Representative Sequences			Length	Strain/Species
genomic	115489832	NCBI Gene Model | MGI Sequence Detail	164	C57BL/6J
transcript	XR_004941713	RefSeq | MGI Sequence Detail	164	C57BL/6J

References

• Summaries
  All 4

  Gene Ontology 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:376316 RNAcentral, Automatic Gene Ontology annotation of non-coding RNA sequences through association of Rfam records with GO terms. 2025;

TSS for Gm23511:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr29015	Chr3:48909172-48909173 (+)	2 bp