Gm23472 Gene Detail

Summary

• Symbol
  Gm23472
• Name
  predicted gene, 23472

• Feature Type
  snRNA gene
• IDs
  MGI:5453249
  NCBI Gene: 115487687
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:72276105-72276295 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453249	snRNA gene	Chr1:72276105-72276295 (+)
129S1/SvImJ	ENSMUSG00200005041	snRNA gene	Chr1:69934580-69934770 (+)
A/J	ENSMUSG00195031933	snRNA gene	Chr1:69352796-69352986 (+)
AKR/J	ENSMUSG00220038655	snRNA gene	Chr1:69505511-69505701 (+)
BALB/cJ	ENSMUSG00180031144	snRNA gene	Chr1:69616894-69617084 (+)
C3H/HeJ	ENSMUSG00175000881	snRNA gene	Chr1:69748150-69748340 (+)
C57BL/6NJ	ENSMUSG00215023862	snRNA gene	Chr1:69662714-69662904 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022198	snRNA gene	Chr1:69417780-69417970 (+)
CBA/J	ENSMUSG00210003261	snRNA gene	Chr1:69444886-69445076 (+)
DBA/2J	ENSMUSG00185005254	snRNA gene	Chr1:70535449-70535639 (+)
FVB/NJ	ENSMUSG00205015029	snRNA gene	Chr1:69171498-69171688 (+)
JF1/MsJ	ENSUMUG00000004515	snRNA gene	Chr1:69440746-69440936 (+)
LP/J	ENSMUSG00230002995	snRNA gene	Chr1:70529707-70529897 (+)
NOD/ShiLtJ	ENSMUSG00190014452	snRNA gene	Chr1:69661740-69661930 (+)
NZO/HlLtJ	ENSMUSG00225040722	snRNA gene	Chr1:73744785-73744975 (+)
PWK/PhJ	ENSLUMG00010007849	snRNA gene	Chr1:69040055-69040245 (+)
SPRET/EiJ	ENSMSPG00010018820	snRNA gene	Chr1:71117854-71118044 (+)
WSB/EiJ	ENSIUOG00005029856	snRNA gene	Chr1:69309138-69309328 (+)

Homology

• Gene Tree
  Gm23472
  

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119668 (Evidence)
• NCBI Gene
  115487687

Representative Sequences			Length	Strain/Species
genomic	115487687	NCBI Gene Model | MGI Sequence Detail	191	C57BL/6J
transcript	XR_004936858	RefSeq | MGI Sequence Detail	191	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;