Gm23447 Gene Detail

Summary

• Symbol
  Gm23447
• Name
  predicted gene, 23447

• Feature Type
  snRNA gene
• IDs
  MGI:5453224
  NCBI Gene: 115488845
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:60793002-60793164 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453224	snRNA gene	Chr17:60793002-60793164 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037638	snRNA gene	Chr17:62343660-62343822 (+)
A/J	MGP_AJ_G0037631	snRNA gene	Chr17:60585519-60585681 (+)
AKR/J	MGP_AKRJ_G0037569	snRNA gene	Chr17:61389586-61389748 (+)
BALB/cJ	MGP_BALBcJ_G0037615	snRNA gene	Chr17:60460161-60460323 (+)
C3H/HeJ	MGP_C3HHeJ_G0037289	snRNA gene	Chr17:62158050-62158212 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038139	snRNA gene	Chr17:64784813-64784975 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035071	snRNA gene	Chr17:56890993-56891155 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0037262	snRNA gene	Chr17:67362895-67363057 (+)
DBA/2J	MGP_DBA2J_G0037442	snRNA gene	Chr17:59311918-59312080 (+)
FVB/NJ	MGP_FVBNJ_G0037388	snRNA gene	Chr17:58864573-58864735 (+)
LP/J	MGP_LPJ_G0037494	snRNA gene	Chr17:63073472-63073634 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0038249	snRNA gene	Chr17:61812101-61812263 (+)
PWK/PhJ	MGP_PWKPhJ_G0036148	snRNA gene	Chr17:58581526-58581769 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035934	snRNA gene	Chr17:58500802-58500964 (+)
WSB/EiJ	MGP_WSBEiJ_G0036671	snRNA gene	Chr17:62432769-62432931 (+)

Homology

• Gene Tree
  Gm23447
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000064732 (Evidence)
• NCBI Gene
  115488845

Representative Sequences			Length	Strain/Species
genomic	115488845	NCBI Gene Model | MGI Sequence Detail	163	C57BL/6J
transcript	XR_004939768	RefSeq | MGI Sequence Detail	163	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;