Gm23247 Gene Detail

Summary

• Symbol
  Gm23247
• Name
  predicted gene, 23247

• Feature Type
  snRNA gene
• IDs
  MGI:5453024
  NCBI Gene: 115487838
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:83411982-83412088 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453024	snRNA gene	Chr11:83411982-83412088 (+)
129S1/SvImJ	ENSMUSG00200051954	snRNA gene	Chr11:80538905-80539011 (+)
A/J	ENSMUSG00195046687	snRNA gene	Chr11:80393357-80393463 (+)
AKR/J	ENSMUSG00220048704	snRNA gene	Chr11:80609110-80609216 (+)
BALB/cJ	ENSMUSG00180044083	snRNA gene	Chr11:80601092-80601198 (+)
C3H/HeJ	ENSMUSG00175039199	snRNA gene	Chr11:80540379-80540485 (+)
C57BL/6NJ	ENSMUSG00215043196	snRNA gene	Chr11:80184725-80184831 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045660	snRNA gene	Chr11:80060708-80060814 (+)
CBA/J	ENSMUSG00210046683	snRNA gene	Chr11:80358000-80358106 (+)
DBA/2J	ENSMUSG00185041486	snRNA gene	Chr11:80693326-80693432 (+)
FVB/NJ	ENSMUSG00205047095	snRNA gene	Chr11:80488650-80488756 (+)
JF1/MsJ	ENSUMUG00000026357	snRNA gene	Chr11:81006641-81006747 (+)
LP/J	ENSMUSG00230030054	snRNA gene	Chr11:81708153-81708259 (+)
NOD/ShiLtJ	ENSMUSG00190047363	snRNA gene	Chr11:80700974-80701080 (+)
NZO/HlLtJ	ENSMUSG00225040192	snRNA gene	Chr11:83835220-83835326 (+)
PWK/PhJ	ENSLUMG00010025270	snRNA gene	Chr11:80521401-80521507 (+)
SPRET/EiJ	ENSMSPG00010043835	snRNA gene	Chr11:80915709-80915815 (+)
WSB/EiJ	ENSIUOG00005038079	snRNA gene	Chr11:80509856-80509962 (+)

Homology

• Gene Tree
  Gm23247
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Targeted
  1
• Transgenic
  3
• Genomic Mutations
  1 involving Gm23247
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  5
• GO References
  1

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119339 (Evidence)
• NCBI Gene
  115487838

Representative Sequences			Length	Strain/Species
genomic	115487838	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004937291	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 10

  Gene Ontology 1

  Phenotypes 6
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:287321 Seo W, et al., Runx-mediated regulation of CCL5 via antagonizing two enhancers influences immune cell function and anti-tumor immunity. Nat Commun. 2020 Mar 26;11(1):1562