Gm23143 Gene Detail

Summary

• Symbol
  Gm23143
• Name
  predicted gene, 23143

• Feature Type
  snRNA gene
• IDs
  MGI:5452920
  NCBI Gene: 115490088
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:117059725-117059840 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452920	snRNA gene	Chr4:117059725-117059840 (+)
129S1/SvImJ	ENSMUSG00200050115	snRNA gene	Chr4:110956071-110956186 (+)
A/J	ENSMUSG00195033418	snRNA gene	Chr4:112215860-112215975 (+)
AKR/J	ENSMUSG00220012426	snRNA gene	Chr4:111563102-111563217 (+)
BALB/cJ	ENSMUSG00180047299	snRNA gene	Chr4:110283361-110283476 (+)
C3H/HeJ	ENSMUSG00175042150	snRNA gene	Chr4:111297731-111297846 (+)
C57BL/6NJ	ENSMUSG00215039268	snRNA gene	Chr4:112383990-112384105 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023057	snRNA gene	Chr4:111081236-111081351 (+)
CBA/J	ENSMUSG00210053439	snRNA gene	Chr4:110911438-110911553 (+)
DBA/2J	ENSMUSG00185049290	snRNA gene	Chr4:112441463-112441578 (+)
FVB/NJ	ENSMUSG00205044619	snRNA gene	Chr4:110380811-110380926 (+)
JF1/MsJ	ENSUMUG00000023410	snRNA gene	Chr4:112347940-112348055 (+)
LP/J	ENSMUSG00230047348	snRNA gene	Chr4:115773293-115773408 (+)
NOD/ShiLtJ	ENSMUSG00190048339	snRNA gene	Chr4:110286111-110286226 (+)
NZO/HlLtJ	ENSMUSG00225011231	snRNA gene	Chr4:121255015-121255130 (+)
PWK/PhJ	ENSLUMG00010048621	snRNA gene	Chr4:109746351-109746466 (+)
SPRET/EiJ	ENSMSPG00010030409	snRNA gene	Chr4:111844759-111844874 (+)
WSB/EiJ	ENSIUOG00005045099	snRNA gene	Chr4:110603555-110603670 (+)

Homology

• Gene Tree
  Gm23143
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23143
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  4
• GO References
  1

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119142 (Evidence)
• NCBI Gene
  115490088

Representative Sequences			Length	Strain/Species
genomic	115490088	NCBI Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	XR_004942401	RefSeq | MGI Sequence Detail	116	C57BL/6J

References

• Summaries
  All 7

  Gene Ontology 1

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12