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Gm23080 Gene Detail
Summary
  • Symbol
    Gm23080
  • Name
    predicted gene, 23080
Location &
Maps
more
  • Sequence Map
    Chr16:35958242-35958344 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    118 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5452857
 snRNA gene Chr16:35958242-35958344 (-)
129S1/SvImJ ENSMUSG00200029584
 snRNA gene Chr16:32977627-32977729 (-)
A/J ENSMUSG00195011527
 snRNA gene Chr16:32529250-32529352 (-)
AKR/J ENSMUSG00220029298
 snRNA gene Chr16:32817065-32817167 (-)
BALB/cJ ENSMUSG00180013311
 snRNA gene Chr16:32744910-32745012 (-)
C3H/HeJ ENSMUSG00175032601
 snRNA gene Chr16:32881541-32881643 (-)
C57BL/6NJ ENSMUSG00215023522
 snRNA gene Chr16:32766019-32766121 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005032394
 snRNA gene Chr16:33144161-33144263 (-)
CBA/J ENSMUSG00210028518
 snRNA gene Chr16:32938645-32938747 (-)
DBA/2J ENSMUSG00185025291
 snRNA gene Chr16:32841645-32841747 (-)
FVB/NJ ENSMUSG00205024646
 snRNA gene Chr16:32877002-32877104 (-)
JF1/MsJ ENSUMUG00000040542
 snRNA gene Chr16:33046547-33046649 (-)
LP/J ENSMUSG00230032916
 snRNA gene Chr16:35497699-35497801 (-)
NOD/ShiLtJ ENSMUSG00190023325
 snRNA gene Chr16:33037819-33037921 (-)
NZO/HlLtJ ENSMUSG00225040270
 snRNA gene Chr16:38597042-38597144 (-)
PWK/PhJ ENSLUMG00010030042
 snRNA gene Chr16:32950722-32950824 (-)
SPRET/EiJ ENSMSPG00010018053
 snRNA gene Chr16:32878805-32878907 (-)
WSB/EiJ ENSIUOG00005028020
 snRNA gene Chr16:32998036-32998138 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115488748 NCBI Gene Model | MGI Sequence Detail 103 C57BL/6J ±  kb
transcript XR_004939444 RefSeq | MGI Sequence Detail 103 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 7
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:154850 Bilodeau M, et al., A retroviral strategy that efficiently creates chromosomal deletions in mammalian cells. Nat Methods. 2007 Mar;4(3):263-8
  • Latest
    J:154051 Bilodeau M, et al., Analysis of blood stem cell activity and cystatin gene expression in a mouse model presenting a chromosomal deletion encompassing Csta and Stfa2l1. PLoS One. 2009;4(10):e7500
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory